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弗雷明汉心脏研究中6号染色体q27区域与肺功能指标的连锁及关联研究

Linkage and association with pulmonary function measures on chromosome 6q27 in the Framingham Heart Study.

作者信息

Wilk Jemma B, DeStefano Anita L, Joost Oscar, Myers Richard H, Cupples L Adrienne, Slater Karen, Atwood Larry D, Heard-Costa Nancy L, Herbert Alan, O'Connor George T, Gottlieb Daniel J

机构信息

Neurology Department, Boston University School of Medicine, Boston, MA 02118, USA.

出版信息

Hum Mol Genet. 2003 Nov 1;12(21):2745-51. doi: 10.1093/hmg/ddg311. Epub 2003 Sep 9.

Abstract

Spirometric measures of pulmonary function have been shown to be highly heritable and evidence for major genes influencing forced expiratory volume in 1 s (FEV1) and forced vital capacity (FVC) have been reported. A genome scan of pulmonary traits in the Framingham Heart Study identified a region on chromosome 6qter with evidence for linkage to FEV1 and the FEV1/FVC ratio. For this study, additional markers were genotyped in the region to refine the location of linkage and test for association. Variance component linkage analysis was performed using GENEHUNTER, and family-based association tests were performed using FBAT. The chromosome 6 telomeric region provided significant evidence of linkage with the additional markers, resulting in a maximum multipoint LOD score of 5.0 for FEV1 at 184.5 cM. LOD scores for FVC and the FEV1/FVC ratio were also above 1.0 in this region. Evidence for association with FEV1 and FVC was observed with D6S281 at 190 cM. The strongest effect was seen with the 224 allele, which was associated with higher levels of FEV1 and FVC in allele carriers compared with those carrying other alleles. This study supports the presence of a gene influencing pulmonary function on the q-terminus of chromosome 6 in the region of 184 cM (D6S503) to 190 cM (D6S281).

摘要

肺功能的肺活量测定指标已被证明具有高度遗传性,并且已有报道称存在影响第1秒用力呼气量(FEV1)和用力肺活量(FVC)的主要基因的证据。在弗雷明汉心脏研究中对肺部特征进行的全基因组扫描在6号染色体q端发现了一个区域,有证据表明该区域与FEV1及FEV1/FVC比值存在连锁关系。在本研究中,对该区域的额外标记进行了基因分型,以优化连锁定位并进行关联测试。使用GENEHUNTER进行方差成分连锁分析,使用FBAT进行基于家系的关联测试。6号染色体端粒区域提供了与额外标记连锁的显著证据,FEV1在184.5 cM处的最大多点LOD得分为5.0。该区域FVC和FEV1/FVC比值的LOD得分也高于1.0。在190 cM处的D6S281观察到与FEV1和FVC相关的证据。224等位基因的效应最强,与携带其他等位基因的个体相比,该等位基因携带者的FEV1和FVC水平更高。本研究支持在6号染色体q端184 cM(D6S503)至190 cM(D6S281)区域存在影响肺功能的基因。

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