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马肝醇脱氢酶的pH依赖性构象状态

pH-dependent conformational states of horse liver alcohol dehydrogenase.

作者信息

Wolfe J K, Weidig C F, Halvorson H R, Shore J D

出版信息

J Biol Chem. 1977 Jan 25;252(2):433-6.

PMID:13068
Abstract

The quenching of liver alcohol dehydrogenase protein fluorescence at alkaline pH indicates two conformational states of the enzyme with a pKa of 9.8+/-0.2, shifted to 10.6+/-0.2 in D2O. NAD+ and 2-p-toluidinonaphthalene-6-sulfonate, a fluorescent probe competitive with coenzyme, bind to the acid conformation of the enzyme. The pKa of the protein-fluorescence quenching curve is shifted toward 7.6 in the presence of NAD+, and the ternary complex formation with NAD+ and trifluoroethanol results in a pH-independent maximal quench. At pH (pD) 10.5, the rate constant for NAD+ binding was 2.6 times faster in D2O2 than in H2O due to the shift of the pKa. Based on these results, a scheme has been proposed in which the state of protonation of an enzyme functional group with a pKa of 9.8 controls the conformational state of the enzyme. NAD+ binds to the acid conformation and subsequently causes another conformational change resulting in the perturbation of the pKa to 7.6. Alcohol then binds to the unprotonated form of the functional group with a pKa of 7.6 in the binary enzyme-NAD+ complex and converts the enzyme to the alkaline conformation. Thus, at neutral pH liver alcohol dehydrogenase undergoes two conformational changes en route to the ternary complex in which hydride transfer occurs.

摘要

在碱性pH条件下,肝脏乙醇脱氢酶蛋白荧光的猝灭表明该酶存在两种构象状态,其pKa为9.8±0.2,在重水中则变为10.6±0.2。NAD⁺和2-对甲苯胺基萘-6-磺酸盐(一种与辅酶竞争的荧光探针)与酶的酸性构象结合。在NAD⁺存在下,蛋白质荧光猝灭曲线的pKa向7.6移动,并且与NAD⁺和三氟乙醇形成的三元复合物导致与pH无关的最大猝灭。在pH(pD)10.5时,由于pKa的移动,NAD⁺结合的速率常数在重水中比在水中快2.6倍。基于这些结果,提出了一种机制,其中pKa为9.8的酶功能基团的质子化状态控制酶的构象状态。NAD⁺与酸性构象结合,随后引起另一种构象变化,导致pKa扰动至7.6。然后乙醇与二元酶-NAD⁺复合物中pKa为7.6的功能基团的未质子化形式结合,并将酶转化为碱性构象。因此,在中性pH条件下,肝脏乙醇脱氢酶在形成三元复合物(其中发生氢化物转移)的过程中经历两种构象变化。

相似文献

1
pH-dependent conformational states of horse liver alcohol dehydrogenase.马肝醇脱氢酶的pH依赖性构象状态
J Biol Chem. 1977 Jan 25;252(2):433-6.
2
Quenching of the intrinsic fluorescence of liver alcohol dehydrogenase by the alkaline transition and by coenzyme binding.
Biochemistry. 1986 Oct 21;25(21):6620-4. doi: 10.1021/bi00369a043.
3
Synergism between coenzyme and alcohol binding to liver alcohol dehydrogenase.辅酶与酒精结合至肝脏乙醇脱氢酶过程中的协同作用。
Eur J Biochem. 1984 Oct 15;144(2):317-24. doi: 10.1111/j.1432-1033.1984.tb08466.x.
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Effect of pH on pyrazole binding to liver alcohol dehydrogenase.pH对吡唑与肝脏乙醇脱氢酶结合的影响。
Eur J Biochem. 1981 Mar;114(3):549-54. doi: 10.1111/j.1432-1033.1981.tb05179.x.
5
Influence of anions and pH on the conformational change of horse liver alcohol dehydrogenase induced by binding of oxidized nicotinamide adenine dinucleotide: binding of chloride to the catalytic metal ion.阴离子和pH值对氧化型烟酰胺腺嘌呤二核苷酸结合诱导的马肝醇脱氢酶构象变化的影响:氯离子与催化金属离子的结合
Biochemistry. 1986 Apr 8;25(7):1584-8. doi: 10.1021/bi00355a020.
6
pH-dependent changes of intrinsic fluorescence of chemically modified liver alcohol dehydrogenases.化学修饰的肝脏乙醇脱氢酶固有荧光的pH依赖性变化
Biochem J. 1978 Jul 1;173(1):269-75. doi: 10.1042/bj1730269.
7
Deprotonation of the horse liver alcohol dehydrogenase-NAD+ complex controls formation of the ternary complexes.马肝醇脱氢酶-NAD⁺复合物的去质子化控制着三元复合物的形成。
Biochemistry. 2005 Sep 27;44(38):12797-808. doi: 10.1021/bi050865v.
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Unified mechanism for proton-transfer reactions affecting the catalytic activity of liver alcohol dehydrogenase.影响肝脏乙醇脱氢酶催化活性的质子转移反应的统一机制。
Eur J Biochem. 1980 Feb;103(3):565-75. doi: 10.1111/j.1432-1033.1980.tb05981.x.
9
Substituent effects on the ionization step regulating desorption and catalytic oxidation of alcohols bound to liver alcohol dehydrogenase.取代基对调节与肝脏乙醇脱氢酶结合的醇类脱附和催化氧化的电离步骤的影响。
Eur J Biochem. 1981 Mar;114(3):555-63. doi: 10.1111/j.1432-1033.1981.tb05180.x.
10
Effect of pH on the process of ternary-complex interconversion in the liver-alcohol-dehydrogenase reaction.pH对肝脏乙醇脱氢酶反应中三元复合物相互转化过程的影响。
Eur J Biochem. 1978 Jun 15;87(2):417-27. doi: 10.1111/j.1432-1033.1978.tb12391.x.

引用本文的文献

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Further evidence in favour of a carbanion mechanism for glycolate oxidase.进一步支持甘醇酸氧化酶碳负离子机制的证据。
FEBS Open Bio. 2023 May;13(5):938-950. doi: 10.1002/2211-5463.13534. Epub 2023 Mar 27.
2
Neutral metal-bound water is the base catalyst in liver alcohol dehydrogenase.与金属结合的中性水是肝脏乙醇脱氢酶中的碱性催化剂。
Proc Natl Acad Sci U S A. 1983 May;80(9):2584-8. doi: 10.1073/pnas.80.9.2584.
3
pH-dependent changes of intrinsic fluorescence of chemically modified liver alcohol dehydrogenases.化学修饰的肝脏乙醇脱氢酶固有荧光的pH依赖性变化
Biochem J. 1978 Jul 1;173(1):269-75. doi: 10.1042/bj1730269.
4
Pre-steady-state kinetic studies on cytoplasmic sheep liver aldehyde dehydrogenase.细胞质绵羊肝脏醛脱氢酶的预稳态动力学研究。
Biochem J. 1977 Nov 1;167(2):469-77. doi: 10.1042/bj1670469.