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通过反式剪接核酶对镰状β-珠蛋白RNA进行高效且特异的修复。

Efficient and specific repair of sickle beta-globin RNA by trans-splicing ribozymes.

作者信息

Byun Jonghoe, Lan Ning, Long Meredith, Sullenger Bruce A

机构信息

Center for Genetic and Cellular Therapies, Departments of Surgery and Genetics, Duke University Medical Center, Durham, North Carolina 27710, USA.

出版信息

RNA. 2003 Oct;9(10):1254-63. doi: 10.1261/rna.5450203.

Abstract

Previously we demonstrated that a group I ribozyme can perform trans-splicing to repair sickle beta-globin transcripts upon transfection of in vitro transcribed ribozyme into mammalian cells. Here, we sought to develop expression cassettes that would yield high levels of active ribozyme after gene transfer. Our initial expression constructs were designed to generate trans-slicing ribozymes identical to those used in our previous RNA transfection studies with ribozymes containing 6-nucleotide long internal guide sequences. The ribozymes expressed from these cassettes, however, were found to be unable to repair sickle beta-globin RNAs. Further experiments revealed that two additional structural elements are important for ribozyme-mediate RNA repair: the P10 interaction formed between the 5' end of the ribozyme and the beginning of the 3' exon and an additional base-pairing interaction formed between an extended guide sequence and the substrate RNA. These optimized expression cassettes yield ribozymes that are able to amend 10%-50% of the sickle beta-globin RNAs in transfected mammalian cells. Finally, a ribozyme with a 5-bp extended guide sequence preferentially reacts with sickle beta-globin RNAs over wild-type beta-globin RNAs, although the wild-type beta-globin transcript forms only a single mismatch with the ribozyme. These results demonstrate that trans-splicing ribozyme expression cassettes can be generated to yield ribozymes that can repair a clinically relevant fraction of sickle beta-globin RNAs in mammalian cells with greatly improved specificity.

摘要

此前我们证明,将体外转录的核酶转染到哺乳动物细胞中时,I 组核酶可进行反式剪接以修复镰状β-珠蛋白转录本。在此,我们试图开发在基因转移后能产生高水平活性核酶的表达盒。我们最初的表达构建体设计用于产生与我们之前使用含 6 个核苷酸长内部引导序列的核酶进行 RNA 转染研究中所用的反式剪接核酶相同的核酶。然而,发现从这些盒式结构表达的核酶无法修复镰状β-珠蛋白 RNA。进一步的实验表明,另外两个结构元件对核酶介导的 RNA 修复很重要:核酶 5' 端与 3' 外显子起始处之间形成的 P10 相互作用,以及延伸的引导序列与底物 RNA 之间形成的额外碱基配对相互作用。这些优化的表达盒产生的核酶能够修复转染的哺乳动物细胞中 10% - 50% 的镰状β-珠蛋白 RNA。最后,具有 5 个碱基对延伸引导序列的核酶与野生型β-珠蛋白 RNA 相比,优先与镰状β-珠蛋白 RNA 反应,尽管野生型β-珠蛋白转录本与核酶仅形成一个错配。这些结果表明,可以生成反式剪接核酶表达盒,以产生能够修复哺乳动物细胞中临床上相关比例的镰状β-珠蛋白 RNA 且特异性大大提高的核酶。

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