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通过定量逆转录聚合酶链反应(RT/PCR)确定的人类α2珠蛋白基因的主要转录单位。

The primary transcription unit of the human alpha 2 globin gene defined by quantitative RT/PCR.

作者信息

Owczarek C M, Enriquez-Harris P, Proudfoot N J

机构信息

Sir William Dunn School of Pathology, University of Oxford, UK.

出版信息

Nucleic Acids Res. 1992 Feb 25;20(4):851-8. doi: 10.1093/nar/20.4.851.

DOI:10.1093/nar/20.4.851
PMID:1371868
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC312028/
Abstract

We have set up an experimental system to map the primary transcription unit of the human alpha 2 globin gene. The duplicated human alpha globin genes (alpha 2-alpha 1) were linked to the alpha globin locus Positive Regulatory Element (PRE) and stably transfected into murine erythroleukaemia cells. We then developed a quantitative reverse transcriptase, polymerase chain reaction assay to map alpha 2 primary transcripts using primer pairs derived from different parts of the alpha 2 globin gene and its 3' flanking region. This approach has revealed the presence of steady state nuclear RNA past the poly(A) site of the alpha 2 globin gene at approximately 40% of the level of unspliced intron transcript. Furthermore, these 3' flanking transcripts diminish 500 bp into the 3' flanking region, identifying this part of the alpha 2 globin gene as the principal region of termination of transcription.

摘要

我们建立了一个实验系统来定位人类α2珠蛋白基因的初级转录单元。将重复的人类α珠蛋白基因(α2-α1)与α珠蛋白基因座正调控元件(PRE)相连,并稳定转染到小鼠红白血病细胞中。然后,我们开发了一种定量逆转录聚合酶链反应测定法,使用源自α2珠蛋白基因及其3'侧翼区域不同部分的引物对来定位α2初级转录本。这种方法揭示了在α2珠蛋白基因的聚腺苷酸化位点之后存在稳态核RNA,其水平约为未剪接内含子转录本水平的40%。此外,这些3'侧翼转录本在进入3'侧翼区域500 bp后减少,确定α2珠蛋白基因的这一部分为转录终止的主要区域。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ecf/312028/0f6d898bddd2/nar00078-0203-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ecf/312028/7b3e49b6caa7/nar00078-0202-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ecf/312028/0f6d898bddd2/nar00078-0203-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ecf/312028/7b3e49b6caa7/nar00078-0202-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ecf/312028/0f6d898bddd2/nar00078-0203-a.jpg

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本文引用的文献

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The duplicated human alpha-globin genes: their relative expression as measured by RNA analysis.重复的人类α-珠蛋白基因:通过RNA分析测定的它们的相对表达
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Alpha-thalassaemia caused by a polyadenylation signal mutation.由聚腺苷酸化信号突变引起的α地中海贫血
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6
Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter.从含有噬菌体SP6启动子的质粒中高效体外合成生物活性RNA和RNA杂交探针。
Nucleic Acids Res. 1984 Sep 25;12(18):7035-56. doi: 10.1093/nar/12.18.7035.
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Transcriptional regulation of hemoglobin switching in chicken embryos.鸡胚中血红蛋白转换的转录调控。
Mol Cell Biol. 1981 Mar;1(3):281-8. doi: 10.1128/mcb.1.3.281-288.1981.
8
Transcriptional interference and termination between duplicated alpha-globin gene constructs suggests a novel mechanism for gene regulation.重复的α-珠蛋白基因构建体之间的转录干扰和终止提示了一种新的基因调控机制。
Nature. 1986;322(6079):562-5. doi: 10.1038/322562a0.
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A poly(A) addition site and a downstream termination region are required for efficient cessation of transcription by RNA polymerase II in the mouse beta maj-globin gene.在小鼠β珠蛋白基因中,高效终止RNA聚合酶II转录需要一个聚腺苷酸(poly(A))添加位点和一个下游终止区域。
Proc Natl Acad Sci U S A. 1987 Dec;84(23):8306-10. doi: 10.1073/pnas.84.23.8306.
10
Developmental expression of PDGF, TGF-alpha, and TGF-beta genes in preimplantation mouse embryos.血小板衍生生长因子、转化生长因子-α和转化生长因子-β基因在小鼠植入前胚胎中的发育表达。
Science. 1988 Sep 30;241(4874):1823-5. doi: 10.1126/science.3175624.