Nishikimi M, Kawai T, Yagi K
Institute of Applied Biochemistry, Yagi Memorial Park, Gifu, Japan.
J Biol Chem. 1992 Oct 25;267(30):21967-72.
Guinea pigs cannot synthesize L-ascorbic acid because of their deficiency in L-gulono-gamma-lactone oxidase, a key enzyme for the biosynthesis of this vitamin in higher animals. In this study we isolated the L-gulono-gamma-lactone oxidase gene of the rat and the homologue of this gene of the guinea pig by screening rat and guinea pig genomic DNA libraries in lambda phage vectors, respectively, using a rat L-gulono-gamma-lactone oxidase cDNA as a probe. Sequencing analysis showed that the amino acid sequence of the rat enzyme is encoded by 12 exons and that all the intron/exon boundaries follow the GT/AG rule. On the other hand, regions corresponding to exons I and V were not identified in the guinea pig L-gulono-gamma-lactone oxidase gene homologue. Other defects found in this gene homologue are a deletion of the nucleotide sequence corresponding to a 3' 84-base pair part of rat exon VI, a 2-base pair deletion in the remaining exon VI-related region, and nonconformance to the GT/AG rule at one of the putative intron/exon boundaries. Furthermore, a large number of mutations were found in the amino acid-coding regions of the guinea pig sequence; more than half of them lead to nonconservative amino acid changes, and there are three stop codons as well. Thus it is clear that the guinea pig homologue of the L-gulono-gamma-lactone oxidase gene exists as a pseudogene that randomly accumulated a large number of mutations without functional constraint since the gene ceased to be active during evolution. On the basis of the neutral theory of evolution, the date of the loss of L-gulono-gamma-lactone oxidase in the ancestors of the guinea pig was roughly calculated to be less than 20 million years ago.
豚鼠由于缺乏L-古洛糖酸-γ-内酯氧化酶(高等动物中这种维生素生物合成的关键酶)而无法合成L-抗坏血酸。在本研究中,我们分别以大鼠L-古洛糖酸-γ-内酯氧化酶cDNA为探针,通过筛选λ噬菌体载体中的大鼠和豚鼠基因组DNA文库,分离出大鼠的L-古洛糖酸-γ-内酯氧化酶基因及其豚鼠同源基因。序列分析表明,大鼠酶的氨基酸序列由12个外显子编码,所有内含子/外显子边界均遵循GT/AG规则。另一方面,在豚鼠L-古洛糖酸-γ-内酯氧化酶基因同源物中未鉴定到与外显子I和V相对应的区域。在该基因同源物中发现的其他缺陷包括对应于大鼠外显子VI 3'端84个碱基对部分的核苷酸序列缺失、其余外显子VI相关区域的2个碱基对缺失以及一个推定的内含子/外显子边界不符合GT/AG规则。此外,在豚鼠序列的氨基酸编码区域发现了大量突变;其中一半以上导致非保守氨基酸变化,并且还有三个终止密码子。因此,很明显,L-古洛糖酸-γ-内酯氧化酶基因的豚鼠同源物作为一个假基因存在,自该基因在进化过程中停止活跃以来,它随机积累了大量无功能限制的突变。根据中性进化理论,粗略计算出豚鼠祖先中L-古洛糖酸-γ-内酯氧化酶丧失的时间不到2000万年前。