Füchslin Hans Peter, Rüegg Irene, Van Der Meer Jan Roelof, Egli Thomas
Swiss Federal Institute for Environmental Science and Technology, Environmental Microbiology and Molecular Ecotoxicology, CH-8600 Dübendorf, Switzerland.
Environ Microbiol. 2003 Oct;5(10):878-87. doi: 10.1046/j.1462-2920.2003.00479.x.
Green fluorescent proteins (GFPs) are frequently used as marker and reporter systems to assess the fate and activity of microbial strains with the ability to degrade xenobiotic compounds. To evaluate the potential of this tool for tracking herbicide-degrading microorganisms in the environment a promoterless gfp was linked to the tfd C promoter, which is activated during degradation of the herbicide 2,4-dichlorophenoxyacetic acid (2,4-D), and integrated into the chromosome of the 2,4-D-degrading strain Ralstonia eutropha JMP 134. The effects of the inserted gfp gene on the kinetics of 2,4-D degradation by R. eutropha in batch and chemostat culture were compared to those of the wild-type strain. In batch culture with 2,4-D as the only carbon and energy source the maximum specific growth rate of the gfp-marked strain did not differ significantly from the wild type. However, compared to the wild type, the 2,4-D steady-state concentration in 2,4-D-limited chemostat cultures of the gfp-marked strain was higher at all dilution rates tested. The reduced competitiveness of the gfp-marked strain at low substrate concentrations was confirmed in a competition experiment for 2,4-D in continuous culture at a dilution rate of 0.075 h-1. Reproducibly, the gfp-marked strain was displaced by the wild-type strain. The study clearly demonstrates that fitness of constructs cannot be assessed by measuring micro max with selected substrates in batch cultures only but that a thorough kinetic analysis is needed, which also considers slow, carbon-limited growth conditions as they occur in the environment.
绿色荧光蛋白(GFP)常被用作标记和报告系统,以评估具有降解外源化合物能力的微生物菌株的命运和活性。为了评估该工具在追踪环境中除草剂降解微生物方面的潜力,将无启动子的gfp与tfd C启动子相连,该启动子在除草剂2,4-二氯苯氧基乙酸(2,4-D)降解过程中被激活,并整合到2,4-D降解菌株真养产碱菌Ralstonia eutropha JMP 134的染色体中。将插入的gfp基因对真养产碱菌在分批培养和恒化器培养中2,4-D降解动力学的影响与野生型菌株进行了比较。在以2,4-D作为唯一碳源和能源的分批培养中,gfp标记菌株的最大比生长速率与野生型没有显著差异。然而,与野生型相比,在所有测试的稀释率下,gfp标记菌株的2,4-D限制恒化器培养中的2,4-D稳态浓度都更高。在稀释率为0.075 h-1的连续培养中进行的2,4-D竞争实验证实了gfp标记菌株在低底物浓度下竞争力的降低。可重复地,gfp标记菌株被野生型菌株取代。该研究清楚地表明,不能仅通过在分批培养中用选定底物测量最大比生长速率来评估构建体的适应性,而是需要进行全面的动力学分析,其中还应考虑环境中出现的缓慢、碳限制生长条件。