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关于胆绿素的构象如何影响其还原为胆红素的研究:一项生物学与分子模拟研究

On how the conformation of biliverdins influences their reduction to bilirubins: a biological and molecular modeling study.

作者信息

Mora María E, Bari Sara E, Awruch Josefina, Delfino José M

机构信息

Departamento de Química Orgánica, Facultad de Farmacia y Bioquímica, Universidad de Buenos Aires, Junín 956, 1113 Buenos Aires, Argentina.

出版信息

Bioorg Med Chem. 2003 Oct 15;11(21):4661-72. doi: 10.1016/s0968-0896(03)00479-6.

DOI:10.1016/s0968-0896(03)00479-6
PMID:14527563
Abstract

The cyclic 2,18-bridged biliverdin (2) is excreted in rat bile without reduction to the corresponding bilirubin. Conformational analysis, employing an optimized Monte Carlo method and a mixed Monte Carlo/stochastic dynamics, reveals that biliverdin IXalpha (1) and the cyclic analogue 2 adopt 'lock washer' conformations, stabilized by the presence of intramolecular hydrogen bonds between N23...H22N and, to a lesser extent, between N23...H24N. Although 2 is very similar in overall shape to 1, the former adopts a 'locked lock washer' conformation unable to undergo fluctuations, thus possibly hampering a proper recognition by biliverdin reductase.

摘要

环状2,18 - 桥连胆绿素(2)在大鼠胆汁中排泄时未还原为相应的胆红素。采用优化的蒙特卡罗方法和混合蒙特卡罗/随机动力学进行的构象分析表明,胆绿素IXα(1)和环状类似物2呈现“锁环垫圈”构象,通过N23...H22N之间以及程度稍小的N23...H24N之间的分子内氢键得以稳定。尽管2在整体形状上与1非常相似,但前者采用了一种无法波动的“锁定锁环垫圈”构象,因此可能妨碍胆绿素还原酶的正常识别。

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引用本文的文献

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Molecular modeling to provide insight into the substrate binding and catalytic mechanism of human biliverdin-IXα reductase.分子建模深入了解人胆红素 IXα 还原酶的底物结合和催化机制。
J Phys Chem B. 2012 Aug 16;116(32):9580-94. doi: 10.1021/jp301456j. Epub 2012 Aug 7.
2
Bile pigment pharmacokinetics and absorption in the rat: therapeutic potential for enteral administration.胆汁色素在大鼠体内的药代动力学和吸收:肠内给药的治疗潜力。
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