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3D-MEDNEs:毒理学化学研究的一种替代性“计算机模拟”技术。1. 化学诱导粒细胞缺乏症的预测。

3D-MEDNEs: an alternative "in silico" technique for chemical research in toxicology. 1. prediction of chemically induced agranulocytosis.

作者信息

Díaz Humberto González, Marrero Yovani, Hernández Ivan, Bastida Iyusmila, Tenorio Esvieta, Nasco Oslay, Uriarte Eugenio, Castañedo Nilo, Cabrera Miguel A, Aguila Edisleidy, Marrero Osmani, Morales Armando, Pérez Maikel

机构信息

Chemical Bio-actives Center, Central University of "Las Villas" 54830, Cuba.

出版信息

Chem Res Toxicol. 2003 Oct;16(10):1318-27. doi: 10.1021/tx0256432.

Abstract

A novel approach to molecular negentropy from the point of view of Markov models is introduced. Stochastic negentropies (MEDNEs) are used to develop a linear discriminant analysis. The discriminant analysis produced a set of two discriminant functions, which gave rise to a very good separation of 93.38% of 151 chemicals (training series) into two groups. The total predictability (86.67%, i.e., 52 compounds out of 60) was tested by means of an external validation set. Randić's orthogonalization procedures allowed interpretation of the model while avoiding collinearity descriptors. On the other hand, factor analysis was used to suggest the relation of MEDNEs with other molecular descriptors and properties into a property space. Three principal factors (related to three orthogonal MEDNEs) can be used to explain approximately 90% of the variance of different molecular parameters of halobenzenes including bulk, energetic, dipolar, molecular surface-related, and hydrophobic parameters. Finally, preliminary experimental results coincide with a theoretical prediction when agranulocytosis induction by G-1, a novel microcidal that presents Z/E isomerism, is not detected.

摘要

本文介绍了一种从马尔可夫模型角度出发的分子负熵新方法。利用随机负熵(MEDNEs)开展线性判别分析。判别分析产生了一组两个判别函数,可将151种化学物质(训练集)中的93.38%很好地分为两组。通过外部验证集测试了总预测能力(86.67%,即60种化合物中的52种)。兰迪奇的正交化程序有助于对模型进行解释,同时避免共线性描述符。另一方面,因子分析用于在属性空间中揭示MEDNEs与其他分子描述符和属性之间的关系。三个主因子(与三个正交MEDNEs相关)可用于解释卤代苯不同分子参数(包括体积、能量、偶极、分子表面相关和疏水参数)约90%的方差。最后,当未检测到新型具有Z/E异构现象的杀微生物剂G-1诱导的粒细胞缺乏症时,初步实验结果与理论预测相符。

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