Strand Kari R, Yang Yi-Shan, Andersson K Kristoffer, Solomon Edward I
Department of Biochemistry, University of Oslo, NO-0316 Oslo, Norway.
Biochemistry. 2003 Oct 28;42(42):12223-34. doi: 10.1021/bi035248q.
Ribonucleotide reductase (RNR) catalyzes the synthesis of the four deoxyribonucleotides needed for DNA synthesis and repair in living organisms. The reduced [Fe(II)Fe(II)] form of the model mammalian enzyme, mouse RNR R2, has been studied using a combination of circular dichroism (CD), magnetic circular dichroism (MCD), and variable-temperature variable-field (VTVH) MCD spectroscopies. Titrations of ferrous ion to the apo-enzyme have been performed and analyzed to investigate the metal binding affinity of the metal-binding site. Spectral features of individual iron sites have been analyzed to obtain detailed geometric and electronic structural information. VTVH MCD data have been collected and analyzed using two complementary models to obtain detailed ground state information including the zero-field splitting (ZFS) of both ferrous centers and the exchange coupling (J) between the two sites. These ground and excited state results provide a complete description of the biferrous site of mouse R2. The biferrous site consists of one 4- and one 5-coordinate iron, with positive and negative ZFS values, respectively. Weak exchange coupling between the two ferrous centers is present, consistent with having carboxylate bridges. The two sites have highly cooperative and weak metal binding affinities. This may be a novel regulatory mechanism for RNR. These results are compared with those from reduced Escherichia coli R2 and reduced acyl-carrier protein Delta(9) desaturase to correlate to similarities and differences in their dioxygen reactivity.
核糖核苷酸还原酶(RNR)催化合成生物体内DNA合成和修复所需的四种脱氧核糖核苷酸。已使用圆二色性(CD)、磁圆二色性(MCD)和变温变场(VTVH)MCD光谱学相结合的方法,对模型哺乳动物酶小鼠RNR R2的还原型[Fe(II)Fe(II)]形式进行了研究。已对脱辅基酶进行亚铁离子滴定并进行分析,以研究金属结合位点的金属结合亲和力。已分析各个铁位点的光谱特征,以获得详细的几何和电子结构信息。已收集VTVH MCD数据,并使用两个互补模型进行分析,以获得详细的基态信息,包括两个亚铁中心的零场分裂(ZFS)以及两个位点之间的交换耦合(J)。这些基态和激发态结果完整描述了小鼠R2的双亚铁位点。双亚铁位点由一个四配位铁和一个五配位铁组成,其ZFS值分别为正和负。两个亚铁中心之间存在弱交换耦合,这与存在羧酸盐桥一致。这两个位点具有高度协同且较弱的金属结合亲和力。这可能是RNR的一种新型调节机制。将这些结果与来自还原型大肠杆菌R2和还原型酰基载体蛋白Δ(9)去饱和酶的结果进行比较,以关联它们在双氧反应性方面的异同。