Blatchly Richard A, Tew Gregory N
Chemistry Department, Keene State College, Keene, New Hampshire 03435, USA.
J Org Chem. 2003 Nov 14;68(23):8780-5. doi: 10.1021/jo034827y.
Theoretical investigations of the relative stabilities of helical vs extended forms of phenylene ethynylene oligomers established that MMFF molecular mechanics was more useful than AM1 or DFT for calculating helical structures and for estimating relative energies. At the level of MMFF, theory predicts that for o- or m-oligophenylene ethynylenes, helix formation is enthalpically favored for ester and ether-substituted oligomers. In contrast to simple electron-demand predictions, we predict that the position of substituents can make a substantial difference in the tendency to form helices.