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法老嗜盐菌视紫红质与其转导蛋白复合物中苏氨酸-204的氢键改变

Hydrogen bonding alteration of Thr-204 in the complex between pharaonis phoborhodopsin and its transducer protein.

作者信息

Sudo Yuki, Furutani Yuji, Shimono Kazumi, Kamo Naoki, Kandori Hideki

机构信息

Laboratory of Biophysical Chemistry, Graduate School of Pharmaceutical Sciences, Hokkaido University, Sapporo 060-0812, Japan.

出版信息

Biochemistry. 2003 Dec 9;42(48):14166-72. doi: 10.1021/bi035678g.

Abstract

Pharaonis phoborhodopsin (ppR, also called pharaonis sensory rhodopsin II, psRII) is a receptor for negative phototaxis in Natronobacterium pharaonis. It forms a 2:2 complex with its transducer protein, pHtrII, in membranes and transmits light signals through the change in the protein-protein interaction. We previously found that the ppR(K) minus ppR spectrum in D(2)O possesses vibrational bands of ppR at 3479 (-)/3369 (+) cm(-1) only in the presence of pHtrII [Furutani, Y., Sudo, Y., Kamo, N., and Kandori, H. (2003) Biochemistry 42, 4837-4842]. A D/H-unexchangeable X-H group appears to form a stronger hydrogen bond upon retinal photoisomerization in the ppR-pHtrII complex. This article aims to identify the group by use of various mutant proteins. According to the crystal structure, Tyr-199 of ppR forms a hydrogen bond with Asn-74 of pHtrII in the complex. Nevertheless, the 3479 (-)/3369 (+) cm(-1) bands were preserved in the Y199F mutant, excluding the possibility that the bands are O-H stretches of Tyr-199. On the other hand, Thr-204 and Tyr-174 form a hydrogen bond between the retinal chromophore pocket and the binding surface of the ppR-pHtrII complex. These FTIR measurements revealed that the bands at 3479 (-)/3369 (+) cm(-1) disappeared in the T204A mutant, while being shifted to 3498 (-) and 3474 (+) cm(-1) in the T204S mutant. They appear at 3430 (-)/3402 (+) cm(-1) in the Y174F mutant. From these results, we concluded that the bands at 3479 (-)/3369 (+) cm(-1) originate from the O-H stretch of Thr-204. A stronger hydrogen bond as shown by a large spectral downshift (110 cm(-1)) suggests that the specific hydrogen bonding alteration of Thr-204 takes place upon retinal photoisomerization, which does not occur in the absence of the transducer protein. Thr-204 has been known as an important residue for color tuning and photocycle kinetics in ppR. The results presented here point to an additional important role of Thr-204 in ppR for the interaction with pHtrII. Specific interaction in the complex that involves Thr-204 presumably affects the decay kinetics and binding affinity in the M intermediate.

摘要

法老视紫红质(ppR,也称为法老嗜盐菌感官视紫红质II,psRII)是嗜盐栖热菌中负趋光性的受体。它在膜中与其转导蛋白pHtrII形成2:2复合物,并通过蛋白质-蛋白质相互作用的变化来传递光信号。我们之前发现,仅在存在pHtrII的情况下,重水(D₂O)中的ppR(K)减去ppR光谱在3479(-)/3369(+)cm⁻¹处具有ppR的振动带[古谷洋一、须藤洋、加茂直、神鸟博(2003年)《生物化学》42卷,4837 - 4842页]。在ppR - pHtrII复合物中,一个D/H不可交换的X - H基团似乎在视黄醛光异构化时形成了更强的氢键。本文旨在通过使用各种突变蛋白来鉴定该基团。根据晶体结构,复合物中ppR的Tyr - 199与pHtrII的Asn - 74形成氢键。然而,在Y199F突变体中,3479(-)/3369(+)cm⁻¹的谱带得以保留,排除了这些谱带是Tyr - 199的O - H伸缩振动的可能性。另一方面,Thr - 204和Tyr - 174在视黄醛发色团口袋与ppR - pHtrII复合物的结合表面之间形成氢键。这些傅里叶变换红外光谱测量结果表明,在T204A突变体中,3479(-)/3369(+)cm⁻¹处的谱带消失,而在T204S突变体中,它们分别移至3498(-)和3474(+)cm⁻¹。在Y174F突变体中,它们出现在3430(-)/3402(+)cm⁻¹处。根据这些结果,我们得出结论,3479(-)/3369(+)cm⁻¹处的谱带源自Thr - 204的O - H伸缩振动。如大的光谱下移(110 cm⁻¹)所示的更强氢键表明,Thr - 204的特定氢键改变发生在视黄醛光异构化时,而在没有转导蛋白的情况下不会发生。Thr - 204已知是ppR中颜色调谐和光循环动力学的重要残基。此处呈现的结果表明Thr - 204在ppR中与pHtrII相互作用方面还有一个重要作用。复合物中涉及Thr - 204的特异性相互作用可能会影响M中间体的衰减动力学和结合亲和力。

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