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机械展开的III型纤连蛋白1中间体的结构与功能意义

Structure and functional significance of mechanically unfolded fibronectin type III1 intermediates.

作者信息

Gao Mu, Craig David, Lequin Olivier, Campbell Iain D, Vogel Viola, Schulten Klaus

机构信息

Beckman Institute and Department of Physics, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.

出版信息

Proc Natl Acad Sci U S A. 2003 Dec 9;100(25):14784-9. doi: 10.1073/pnas.2334390100. Epub 2003 Dec 1.

DOI:10.1073/pnas.2334390100
PMID:14657397
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC299803/
Abstract

Fibronectin (FN) forms fibrillar networks coupling cells to the extracellular matrix. The formation of FN fibrils, fibrillogenesis, is a tightly regulated process involving the exposure of cryptic binding sites in individual FN type III (FN-III) repeats presumably exposed by mechanical tension. The FN-III1 module has been previously proposed to contain such cryptic sites that promote the assembly of extracellular matrix FN fibrils. We have combined NMR and steered molecular dynamics simulations to study the structure and mechanical unfolding pathway of FN-III1. This study finds that FN-III1 consists of a beta-sandwich structure that unfolds to a mechanically stable intermediate about four times the length of the native folded state. Considering previous experimental findings, our studies provide a structural model by which mechanical stretching of FN-III1 may induce fibrillogenesis through this partially unfolded intermediate.

摘要

纤连蛋白(FN)形成将细胞与细胞外基质相连的纤维状网络。FN纤维的形成,即纤维形成过程,是一个受到严格调控的过程,涉及到单个III型FN(FN-III)重复序列中隐蔽结合位点的暴露,推测这些位点是由机械张力暴露的。先前有人提出FN-III1模块包含促进细胞外基质FN纤维组装的此类隐蔽位点。我们结合了核磁共振(NMR)和定向分子动力学模拟来研究FN-III1的结构和机械展开途径。这项研究发现,FN-III1由一个β-三明治结构组成,该结构展开形成一个机械稳定的中间体,其长度约为天然折叠状态的四倍。考虑到先前的实验结果,我们的研究提供了一个结构模型,通过该模型,FN-III1的机械拉伸可能通过这个部分展开的中间体诱导纤维形成。

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本文引用的文献

1
All-atom empirical potential for molecular modeling and dynamics studies of proteins.蛋白质分子建模和动力学研究的全原子经验势。
J Phys Chem B. 1998 Apr 30;102(18):3586-616. doi: 10.1021/jp973084f.
2
The program XEASY for computer-supported NMR spectral analysis of biological macromolecules.用于生物大分子的计算机支持的 NMR 光谱分析的 XEASY 程序。
J Biomol NMR. 1995 Jul;6(1):1-10. doi: 10.1007/BF00417486.
3
Anastellin, an FN3 fragment with fibronectin polymerization activity, resembles amyloid fibril precursors.Anastellin是一种具有纤连蛋白聚合活性的FN3片段,类似于淀粉样原纤维前体。
J Mol Biol. 2003 Sep 5;332(1):205-15. doi: 10.1016/s0022-2836(03)00890-8.
4
The Xplor-NIH NMR molecular structure determination package.Xplor-NIH核磁共振分子结构测定软件包。
J Magn Reson. 2003 Jan;160(1):65-73. doi: 10.1016/s1090-7807(02)00014-9.
5
Identifying unfolding intermediates of FN-III(10) by steered molecular dynamics.通过定向分子动力学识别纤连蛋白III型结构域10(FN-III(10))的解折叠中间体
J Mol Biol. 2002 Nov 8;323(5):939-50. doi: 10.1016/s0022-2836(02)01001-x.
6
Mapping the heparin-binding site on the 13-14F3 fragment of fibronectin.绘制纤连蛋白13 - 14F3片段上的肝素结合位点图谱。
J Biol Chem. 2002 Dec 27;277(52):50629-35. doi: 10.1074/jbc.M208956200. Epub 2002 Oct 10.
7
A cryptic fragment from fibronectin's III1 module localizes to lipid rafts and stimulates cell growth and contractility.纤连蛋白III1模块的一个神秘片段定位于脂筏,并刺激细胞生长和收缩性。
J Cell Biol. 2002 Jul 8;158(1):175-84. doi: 10.1083/jcb.200112031.
8
The mechanical hierarchies of fibronectin observed with single-molecule AFM.通过单分子原子力显微镜观察到的纤连蛋白的机械层次结构。
J Mol Biol. 2002 May 31;319(2):433-47. doi: 10.1016/S0022-2836(02)00306-6.
9
Fibronectin extension and unfolding within cell matrix fibrils controlled by cytoskeletal tension.细胞骨架张力控制细胞外基质原纤维内纤连蛋白的伸展与解折叠。
Proc Natl Acad Sci U S A. 2002 Apr 16;99(8):5139-43. doi: 10.1073/pnas.072650799.
10
Coexisting conformations of fibronectin in cell culture imaged using fluorescence resonance energy transfer.使用荧光共振能量转移成像技术对细胞培养中纤连蛋白的共存构象进行成像。
Proc Natl Acad Sci U S A. 2001 Dec 4;98(25):14464-8. doi: 10.1073/pnas.251422998. Epub 2001 Nov 20.