• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过自然丰度碳-13核磁共振光谱对铜绿假单胞菌天青蛋白的单个碳位点进行的研究。

Studies of individual carbon sites of azurin from Pseudomonas aeruginosa by natural-abundance carbon-13 nuclear magnetic resonance spectroscopy.

作者信息

Ugurbil K, Norton R S, Allerhand A, Bersohn R

出版信息

Biochemistry. 1977 Mar 8;16(5):886-94. doi: 10.1021/bi00624a012.

DOI:10.1021/bi00624a012
PMID:14666
Abstract

The environments of the aromatic residues (and of the single arginine residue) of azurin from Pseudomonas aeruginosa are investigated by means of natural-abundance 13C Fourier transform NMR spectroscopy. In the case of the diamagnetic Cu(I) azurin, all 17 nonprotonated aromatic carbons (and Czota of Arg-79) yield narrow resonances. Furthermore, a single-carbon amide carbonyl resonance with an unusual chemical shift (peak chi) is observed. The pH dependence of chemical shifts is used to identify the resonances of Cgamma of titrating histidines, and of Cgamma and Czota of the two tyrosines. The resonances of Cgamma and Cdelta2 of the single tryptophan residue (and Czota of Arg-79) are also identified. The pKa values of the two tyrosines are different from each other and higher than typical values of "solvent-exposed" tyrosine residues. Two of the four histidine residues do not titrate (in the pH range 4 to 11). The resonance of Cgamma of one histidine exhibits a pH titration with fast proton exchange behavior and a pKa of 7.5 +/- 0.2. The direction of the titration shift indicates that the imidazole form of this histidine is the Ndelta1-H tautomer. The Cgamma resonance of the other titrating histidine exhibits slow exchange behavior with a pKa of about 7. The imidazole form of this histidine is the Nepsilon2-H tautomer. When going to the paramagnetic Cu(II) protein, only 11 of the 19 carbons mentioned above yield resonances that are narrow enough to be detected. Also, some of the observed resonances exhibit significant paramagnetic broadening. A comparison of spectra of fully reduced azurin, mixtures of reduced and oxidized azurin, and fully oxidized azurin yields the following information. (i) Peak chi arises from an amide group that probably is coordinated to the copper. (ii) The two nontitrating histidine residues are probably copper ligands, with Ndelta1 coordinated to the metal. (iii) The side chains of Arg-79 and the two tyrosine residues are not coordinated to the copper, and Trp-48 is probably not a ligand either. (iv) The gamma carbons of Trp-48, the tyrosine with the lower pKa, the titrating histidine with slow exchange behavior, and three or four of the six phenylalanine residues are sufficiently close to the copper to undergo significant paramagnetic broadening in the spectrum of oxidized azurin.

摘要

利用天然丰度的13C傅里叶变换核磁共振光谱法研究了铜绿假单胞菌天青蛋白中芳香族残基(以及单个精氨酸残基)的环境。对于抗磁性的Cu(I)天青蛋白,所有17个非质子化芳香族碳(以及Arg-79的Cζ)产生窄共振。此外,观察到一个具有异常化学位移(峰χ)的单碳酰胺羰基共振。化学位移的pH依赖性用于鉴定滴定组氨酸的Cγ共振,以及两个酪氨酸的Cγ和Cζ共振。还鉴定了单个色氨酸残基的Cγ和Cδ2共振(以及Arg-79的Cζ)。两个酪氨酸的pKa值彼此不同,且高于“溶剂暴露”酪氨酸残基的典型值。四个组氨酸残基中有两个在pH范围4至11内不发生滴定。一个组氨酸的Cγ共振表现出具有快速质子交换行为且pKa为7.5±0.2的pH滴定。滴定位移的方向表明该组氨酸的咪唑形式是Nδ1-H互变异构体。另一个滴定组氨酸的Cγ共振表现出缓慢交换行为,pKa约为7。该组氨酸的咪唑形式是Nε2-H互变异构体。当变为顺磁性的Cu(II)蛋白时,上述19个碳中只有11个产生足够窄以便检测的共振。而且,一些观察到的共振表现出明显的顺磁性展宽。对完全还原的天青蛋白、还原和氧化天青蛋白混合物以及完全氧化天青蛋白的光谱进行比较,得到以下信息。(i)峰χ来自可能与铜配位的酰胺基团。(ii)两个非滴定组氨酸残基可能是铜配体,Nδ1与金属配位。(iii)Arg-79和两个酪氨酸残基的侧链不与铜配位,Trp-48可能也不是配体。(iv)Trp-48的γ碳、pKa较低的酪氨酸、具有缓慢交换行为的滴定组氨酸以及六个苯丙氨酸残基中的三或四个与铜足够接近,以至于在氧化天青蛋白的光谱中会发生明显的顺磁性展宽。

相似文献

1
Studies of individual carbon sites of azurin from Pseudomonas aeruginosa by natural-abundance carbon-13 nuclear magnetic resonance spectroscopy.通过自然丰度碳-13核磁共振光谱对铜绿假单胞菌天青蛋白的单个碳位点进行的研究。
Biochemistry. 1977 Mar 8;16(5):886-94. doi: 10.1021/bi00624a012.
2
Characteristics of azurin from Pseudomonas aeruginosa via 270-MHz 1H nuclear magnetic resonance spectroscopy.通过270兆赫兹氢核磁共振光谱法对铜绿假单胞菌中蓝铜蛋白的特征分析
J Inorg Biochem. 1979 Oct;11(2):79-93. doi: 10.1016/s0162-0134(00)80174-9.
3
Studies of individual carbon sites of hen egg white lysozyme by natural abundance carbon 13 nuclear magnetic resonance spectroscopy. Assignment of the nonprotonated aromatic carbon resonances to specific residues in the sequence.利用天然丰度碳-13核磁共振光谱对鸡蛋清溶菌酶的单个碳原子位点进行研究。将非质子化芳香碳共振峰归属到序列中的特定残基。
J Biol Chem. 1977 Mar 10;252(5):1786-94.
4
The assignment of the 1H nuclear magnetic resonance spectrum of azurin. An investigation of the 1H NMR spectrum of the blue copper protein, azurin, from Pseudomonas aeruginosa, with reference to the previously determined crystal structure.天青蛋白的1H核磁共振谱的归属。参照先前测定的晶体结构,对来自铜绿假单胞菌的蓝色铜蛋白天青蛋白的1H NMR谱进行研究。
Eur J Biochem. 1984 Jan 2;138(1):141-52. doi: 10.1111/j.1432-1033.1984.tb07893.x.
5
Cytochrome c: observation of numerous single-carbon sites of the reduced and oxidized species by means of natural-abundance 13C nuclear magnetic resonance spectroscopy.细胞色素c:借助自然丰度13C核磁共振光谱法对还原态和氧化态物种的众多单碳位点进行观测。
Proc Natl Acad Sci U S A. 1973 Dec;70(12):3531-5. doi: 10.1073/pnas.70.12.3531.
6
The pH and redox-state dependence of the copper site in azurin from Pseudomonas aeruginosa as studied by EXAFS.通过扩展X射线吸收精细结构(EXAFS)研究铜绿假单胞菌中蓝铜蛋白铜位点的pH值和氧化还原状态依赖性。
Biochim Biophys Acta. 1986 Sep 26;873(2):214-27. doi: 10.1016/0167-4838(86)90048-8.
7
Nuclear magnetic resonance titration curves of histidine ring protons. Human metmyoglobin and the effects of azide on human, horse, and sperm whale metmyoglobins.组氨酸环质子的核磁共振滴定曲线。人高铁肌红蛋白以及叠氮化物对人、马和抹香鲸高铁肌红蛋白的影响。
J Biol Chem. 1975 Sep 25;250(18):7461-72.
8
1H NMR studies of electron exchange rate of Pseudomonas aeruginosa azurin.铜绿假单胞菌天青蛋白电子交换速率的核磁共振氢谱研究
Proc Natl Acad Sci U S A. 1985 Apr;82(7):2039-43. doi: 10.1073/pnas.82.7.2039.
9
Studies of individual carbon sites of proteins in solution by natural abundance carbon 13 nuclear magnetic resonance spectroscopy. Relaxation behavior.通过天然丰度碳-13核磁共振光谱法对溶液中蛋白质的单个碳位点进行研究。弛豫行为。
J Biol Chem. 1975 Aug 25;250(16):6368-80.
10
Proton NMR of the histidines of azurin from Alcaligenes faecalis: linkage of histidine-35 with redox kinetics.粪产碱杆菌蓝铜蛋白中组氨酸的质子核磁共振:组氨酸-35与氧化还原动力学的联系
Proc Natl Acad Sci U S A. 1982 Nov;79(22):6807-11. doi: 10.1073/pnas.79.22.6807.

引用本文的文献

1
Photogeneration and Quenching of Tryptophan Radical in Azurin.天青蛋白中色氨酸自由基的光生和猝灭
J Phys Chem B. 2015 Jul 23;119(29):9438-49. doi: 10.1021/jp511523z. Epub 2015 Feb 17.
2
Characterization of the blue copper site in oxidized azurin by extended x-ray absorption fine structure: Determination of a short Cu-S distance.通过扩展X射线吸收精细结构对氧化型天青蛋白中蓝色铜位点的表征:短Cu-S距离的测定。
Proc Natl Acad Sci U S A. 1978 Sep;75(9):4069-73. doi: 10.1073/pnas.75.9.4069.
3
Plastocyanin: structural and functional analysis.
质体蓝素:结构与功能分析
J Bioenerg Biomembr. 1994 Feb;26(1):49-66. doi: 10.1007/BF00763219.
4
Stellacyanin. Studies of the metal-binding site using x-ray absorption spectroscopy.星蓝蛋白。使用X射线吸收光谱法对金属结合位点的研究。
Biophys J. 1982 Jun;38(3):277-85. doi: 10.1016/S0006-3495(82)84559-1.
5
Normal coordinate analysis of the copper center of azurin and the assignment of its resonance Raman spectrum.天青蛋白铜中心的正规坐标分析及其共振拉曼光谱的归属
Proc Natl Acad Sci U S A. 1982 Oct;79(20):6396-400. doi: 10.1073/pnas.79.20.6396.
6
Conformational heterogeneity of the copper binding site in azurin. A time-resolved fluorescence study.天青蛋白中铜结合位点的构象异质性。一项时间分辨荧光研究。
Biophys J. 1983 Mar;41(3):233-44. doi: 10.1016/S0006-3495(83)84433-6.
7
The accessibility of type I Cu(II) centers in laccase, azurin, and stellacyanin to exchangeable hydrogen and ambient water.漆酶、天青蛋白和杨梅素中I型铜(II)中心与可交换氢和环境水的可及性。
Biophys J. 1984 Apr;45(4):755-66. doi: 10.1016/S0006-3495(84)84219-8.
8
1H NMR studies of electron exchange rate of Pseudomonas aeruginosa azurin.铜绿假单胞菌天青蛋白电子交换速率的核磁共振氢谱研究
Proc Natl Acad Sci U S A. 1985 Apr;82(7):2039-43. doi: 10.1073/pnas.82.7.2039.
9
Activation of electron transfer reactions of the blue proteins.蓝色蛋白质电子转移反应的激活。
Biophys J. 1978 Apr;22(1):139-42. doi: 10.1016/S0006-3495(78)85479-4.