• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

杨树基因组序列:一种生态优势植物物种的功能基因组学

Poplar genome sequence: functional genomics in an ecologically dominant plant species.

作者信息

Brunner Amy M, Busov Victor B, Strauss Steven H

机构信息

Department of Forest Science, Oregon State University, Corvallis, OR 97331-5752, USA.

出版信息

Trends Plant Sci. 2004 Jan;9(1):49-56. doi: 10.1016/j.tplants.2003.11.006.

DOI:10.1016/j.tplants.2003.11.006
PMID:14729219
Abstract

In addition to their value for wood products, members of the genus Populus (poplars) provide a range of ecological services, including carbon sequestration, bioremediation, nutrient cycling, biofiltration and diverse habitats. They are also widely used model organisms for tree molecular biology and biotechnology. The sequencing of the poplar genome to an approximately 6x depth adds to a long list of important attributes for research. These include facile transformation, vegetative propagation, rapid growth, modest genome size and extensive expressed sequence tags. Here, we discuss how the genome sequence and transformability of poplar, together with its high levels of genetic and ecological diversity, are enabling new insights into the genetic programs controlling ontogeny, ecological adaptation and environmental physiology of trees.

摘要

除了其在木材产品方面的价值外,杨属(杨树)成员还提供一系列生态服务,包括碳固存、生物修复、养分循环、生物过滤和多样的栖息地。它们也是树木分子生物学和生物技术中广泛使用的模式生物。杨树基因组测序达到约6倍深度,这增加了一长串可供研究的重要特性。这些特性包括易于转化、营养繁殖、生长迅速、基因组规模适度以及大量的表达序列标签。在这里,我们讨论杨树的基因组序列和可转化性,以及其高度的遗传和生态多样性,如何为控制树木个体发育、生态适应和环境生理学的遗传程序带来新的见解。

相似文献

1
Poplar genome sequence: functional genomics in an ecologically dominant plant species.杨树基因组序列:一种生态优势植物物种的功能基因组学
Trends Plant Sci. 2004 Jan;9(1):49-56. doi: 10.1016/j.tplants.2003.11.006.
2
Poplar genomics is getting popular: the impact of the poplar genome project on tree research.杨树基因组学正日益受到关注:杨树基因组计划对树木研究的影响。
Plant Biol (Stuttg). 2004 Jan-Feb;6(1):2-4. doi: 10.1055/s-2003-44715.
3
A dense linkage map of hybrid cottonwood (Populus fremontii x P. angustifolia) contributes to long-term ecological research and comparison mapping in a model forest tree.杂交毛果杨(Populus fremontii x P. angustifolia)的高密度连锁图谱有助于在模式林木中开展长期生态研究和比较作图。
Heredity (Edinb). 2008 Jan;100(1):59-70. doi: 10.1038/sj.hdy.6801063. Epub 2007 Sep 26.
4
The salinity tolerant poplar database (STPD): a comprehensive database for studying tree salt-tolerant adaption and poplar genomics.耐盐杨树数据库(STPD):一个用于研究树木耐盐适应性和杨树基因组学的综合数据库。
BMC Genomics. 2015 Mar 17;16(1):205. doi: 10.1186/s12864-015-1414-7.
5
Populus: a model system for plant biology.杨树:植物生物学的一个模型系统。
Annu Rev Plant Biol. 2007;58:435-58. doi: 10.1146/annurev.arplant.58.032806.103956.
6
Revisiting the sequencing of the first tree genome: Populus trichocarpa.重新审视第一个树基因组的测序:毛白杨。
Tree Physiol. 2013 Apr;33(4):357-64. doi: 10.1093/treephys/tps081. Epub 2012 Oct 25.
7
Characterization of full-length enriched expressed sequence tags of stress-treated poplar leaves.应激处理杨树叶片全长富集表达序列标签的表征
Plant Cell Physiol. 2004 Dec;45(12):1738-48. doi: 10.1093/pcp/pci009.
8
A NAC domain protein family contributing to the regulation of wood formation in poplar.一个 NAC 结构域蛋白家族有助于调控杨树的木材形成。
Plant J. 2011 Aug;67(3):499-512. doi: 10.1111/j.1365-313X.2011.04614.x. Epub 2011 Jun 7.
9
Genome-wide analysis of the MADS-box gene family in Populus trichocarpa.毛果杨MADS-box基因家族的全基因组分析。
Gene. 2006 Aug 15;378:84-94. doi: 10.1016/j.gene.2006.05.022. Epub 2006 Jul 10.
10
Transcriptome analyses of Populus x euramericana clone I-214 leaves exposed to excess zinc.美洲黑杨 I-214 叶片暴露于过量锌下的转录组分析。
Tree Physiol. 2011 Dec;31(12):1293-308. doi: 10.1093/treephys/tpr106. Epub 2011 Oct 27.

引用本文的文献

1
Genome-Wide Identification of the Dof Gene Family and Functional Analysis of PeSCAP1 in Regulating Guard Cell Maturation in .基因组范围内Dof基因家族的鉴定以及PeSCAP1在调控[植物名称]保卫细胞成熟中的功能分析
Int J Mol Sci. 2025 Apr 17;26(8):3798. doi: 10.3390/ijms26083798.
2
Comparative transcriptomic and phenotypic analysis of monoclonal and polyclonal genotypes.单克隆和多克隆基因型的比较转录组学和表型分析。
Front Plant Sci. 2025 Jan 23;15:1498535. doi: 10.3389/fpls.2024.1498535. eCollection 2024.
3
A nearly gapless, highly contiguous reference genome for a doubled haploid line of , enabling advanced genomic studies.
一个近乎无间隙、高度连续的参考基因组,用于某双单倍体系,可实现先进的基因组研究。
For Res (Fayettev). 2024 May 13;4:e019. doi: 10.48130/forres-0024-0016. eCollection 2024.
4
A protocol for identifying universal reference genes within a genus based on RNA-Seq data: a case study of poplar stem gene expression.一种基于RNA-Seq数据在一个属内鉴定通用参考基因的方案:杨树茎基因表达的案例研究
For Res (Fayettev). 2024 Jun 1;4:e021. doi: 10.48130/forres-0024-0017. eCollection 2024.
5
Genome-wide identification and gene expression networks of LBD transcription factors in Populus trichocarpa.杨属 LBD 转录因子的全基因组鉴定和基因表达网络。
BMC Genomics. 2024 Oct 3;25(1):920. doi: 10.1186/s12864-024-10848-4.
6
Comparative Genomics Analysis of the Populus Epidermal Pattern Factor (EPF) Family Revealed Their Regulatory Effects in Stomatal Development.杨树表皮模式因子(EPF)家族的比较基因组学分析揭示了它们在气孔发育中的调控作用。
Int J Mol Sci. 2024 Sep 19;25(18):10052. doi: 10.3390/ijms251810052.
7
Comparative genomic analysis of the Growth-Regulating Factors-Interacting Factors (GIFs) in six Salicaceae species and functional analysis of PeGIF3 reveals their regulatory role in Populus heteromorphic leaves.六个杨柳科物种中生长调节因子相互作用因子(GIFs)的比较基因组分析和 PeGIF3 的功能分析表明它们在杨属异型叶中具有调节作用。
BMC Genomics. 2024 Mar 28;25(1):317. doi: 10.1186/s12864-024-10221-5.
8
The chromosome-scale genome and population genomics reveal the adaptative evolution of to desertification environment.染色体水平的基因组和群体基因组学揭示了(物种)对沙漠化环境的适应性进化。 (原句中“of to”表述有误,推测应是“of...to...”,这里补充完整为“物种对”使句子逻辑更通顺)
Hortic Res. 2024 Feb 6;11(3):uhae034. doi: 10.1093/hr/uhae034. eCollection 2024 Mar.
9
Growth-regulating factor 15-mediated vascular cambium differentiation positively regulates wood formation in hybrid poplar ( × ).生长调节因子15介导的维管形成层分化正向调控杂交杨树(×)的木材形成。
Front Plant Sci. 2024 Feb 15;15:1343312. doi: 10.3389/fpls.2024.1343312. eCollection 2024.
10
Heterogeneous Expression of Subclass II of SNF1-Related Kinase 2 Improves Drought Tolerance via Stomatal Regulation in Poplar.SNF1相关激酶2亚类II的异质表达通过杨树气孔调节提高耐旱性。
Life (Basel). 2024 Jan 22;14(1):161. doi: 10.3390/life14010161.