Czepas Jan, Devedjiev Yancho, Krowarsch Daniel, Derewenda Urszula, Otlewski Jacek, Derewenda Zygmunt S
Department of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, VA 22908-0736, USA.
Acta Crystallogr D Biol Crystallogr. 2004 Feb;60(Pt 2):275-80. doi: 10.1107/S0907444903026271. Epub 2004 Jan 23.
The potential of rational surface mutagenesis for enhanced protein crystallization is being probed in an ongoing effort. In previous work, it was hypothesized that residues with high conformational entropy such as Glu and Lys are suitable targets for surface mutagenesis, as they are rarely incorporated in crystal contacts or protein-protein interfaces. Previous experiments using Lys-->Ala, Glu-->Ala and Glu-->Asp mutants confirmed that mutated proteins were more likely to crystallize. In the present paper, the usefulness of Lys-->Arg mutations is studied. Several mutations of the globular domain of human RhoGDI were generated, including the single mutants K105R, K113R, K127R, K138R and K141R, the double mutants K(98,99)R and K(199,200)R and the triple mutants K(98,99,105)R and K(135,138,141)R. It is shown that Lys-->Arg mutants are more likely to crystallize than the wild-type protein, although not as likely as Lys-->Ala mutants. Out of the nine mutants tested, five produced diffracting crystals, including the K(199,200)R double mutant, which crystallized in a new space group and exceeded by approximately 1.0 A the resolution of the diffraction of the wild-type crystal. Major crystal contacts in the new lattice were created by the mutated epitope.
目前正在进行一项研究,探讨合理的表面诱变在增强蛋白质结晶方面的潜力。在先前的工作中,有人提出,具有高构象熵的残基,如Glu和Lys,是表面诱变的合适靶点,因为它们很少参与晶体接触或蛋白质-蛋白质界面。先前使用Lys→Ala、Glu→Ala和Glu→Asp突变体的实验证实,突变后的蛋白质更有可能结晶。在本文中,研究了Lys→Arg突变的有效性。构建了人RhoGDI球状结构域的多个突变体,包括单突变体K105R、K113R、K127R、K138R和K141R,双突变体K(98,99)R和K(199,200)R,以及三突变体K(98,99,105)R和K(135,138,141)R。结果表明,Lys→Arg突变体比野生型蛋白质更有可能结晶,尽管不如Lys→Ala突变体那样容易结晶。在所测试的9个突变体中,有5个产生了可用于衍射分析的晶体,其中包括K(199,200)R双突变体,它在一个新的空间群中结晶,其衍射分辨率比野生型晶体高出约1.0 Å。新晶格中的主要晶体接触是由突变表位形成的。