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在大肠杆菌中表达的猪肾果糖-1,6-二磷酸酶的T态和R态变构状态下活性位点突变体(精氨酸-243→丙氨酸)的晶体结构。

Crystal structures of the active site mutant (Arg-243-->Ala) in the T and R allosteric states of pig kidney fructose-1,6-bisphosphatase expressed in Escherichia coli.

作者信息

Stec B, Abraham R, Giroux E, Kantrowitz E R

机构信息

Department of Chemistry, Merkert Chemistry Center, Boston College, Chestnut Hill, Massachusetts 02167, USA.

出版信息

Protein Sci. 1996 Aug;5(8):1541-53. doi: 10.1002/pro.5560050810.

DOI:10.1002/pro.5560050810
PMID:8844845
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2143480/
Abstract

The active site of pig kidney fructose-1,6-bisphosphatase (EC 3.1.3.11) is shared between subunits, Arg-243 of one chain interacting with fructose-1,6-bisphosphate or fructose-2,6-bisphosphate in the active site of an adjacent chain. In this study, we present the X-ray structures of the mutant version of the enzyme with Arg-243 replaced by alanine, crystallized in both T and R allosteric states. Kinetic characteristics of the altered enzyme showed the magnesium binding and inhibition by AMP differed slightly; affinity for the substrate fructose-1,6-bisphosphate was reduced 10-fold and affinity for the inhibitor fructose-2,6-bisphosphate was reduced 1,000-fold (Giroux E, Williams MK, Kantrowitz ER, 1994, J Biol Chem 269:31404-31409). The X-ray structures show no major changes in the organization of the active site compared with wild-type enzyme, and the structures confirm predictions of molecular dynamics simulations involving Lys-269 and Lys-274. Comparison of two independent models of the T form structures have revealed small but significant changes in the conformation of the bound AMP molecules and small reorganization of the active site correlated with the presence of the inhibitor. The differences in kinetic properties of the mutant enzyme indicate the key importance of Arg-243 in the function of fructose-1,6-bisphosphatase. Calculations using the X-ray structures of the Arg-243-->Ala enzyme suggest that the role of Arg-243 in the wild-type enzyme is predominantly electrostatic in nature.

摘要

猪肾果糖-1,6-二磷酸酶(EC 3.1.3.11)的活性位点位于亚基之间,一条链上的精氨酸-243与相邻链活性位点中的果糖-1,6-二磷酸或果糖-2,6-二磷酸相互作用。在本研究中,我们展示了精氨酸-243被丙氨酸取代的该酶突变体版本的X射线结构,其在T态和R态变构状态下均已结晶。改变后的酶的动力学特征表明,镁结合以及AMP的抑制作用略有不同;对底物果糖-1,6-二磷酸的亲和力降低了10倍,对抑制剂果糖-2,6-二磷酸的亲和力降低了1000倍(吉鲁克斯E、威廉姆斯MK、坎特罗维茨ER,1994年,《生物化学杂志》269:31404 - 31409)。X射线结构显示,与野生型酶相比,活性位点的组织没有重大变化,并且这些结构证实了涉及赖氨酸-269和赖氨酸-274的分子动力学模拟的预测。对T态结构的两个独立模型的比较揭示了结合的AMP分子构象的微小但显著的变化以及与抑制剂存在相关的活性位点的小重组。突变酶动力学性质的差异表明精氨酸-243在果糖-1,6-二磷酸酶功能中的关键重要性。使用精氨酸-243→丙氨酸酶的X射线结构进行的计算表明,野生型酶中精氨酸-243的作用本质上主要是静电作用。

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本文引用的文献

1
ALLOSTERIC INHIBITION OF RAT LIVER FRUCTOSE 1,6-DIPHOSPHATASE BY ADENOSINE 5'-MONOPHOSPHATE.腺苷5'-单磷酸对大鼠肝脏果糖1,6-二磷酸酶的变构抑制作用
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Crystallographic studies of the catalytic mechanism of the neutral form of fructose-1,6-bisphosphatase.果糖-1,6-二磷酸酶中性形式催化机制的晶体学研究。
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Site-specific mutagenesis of the metal binding sites of porcine fructose-1,6-bisphosphatase.猪果糖-1,6-二磷酸酶金属结合位点的定点诱变
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The allosteric site of human liver fructose-1,6-bisphosphatase. Analysis of six AMP site mutants based on the crystal structure.人肝脏果糖-1,6-二磷酸酶的变构位点。基于晶体结构对六个AMP位点突变体的分析。
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8
Replacement of glutamic acid 29 with glutamine leads to a loss of cooperativity for AMP with porcine fructose-1,6-bisphosphatase.将谷氨酸29替换为谷氨酰胺会导致猪果糖-1,6-二磷酸酶与AMP的协同性丧失。
J Biol Chem. 1994 Feb 25;269(8):5554-8.
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