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来自桑萎蔫病菌的氧化态Ohr的结晶及初步X射线衍射分析

Crystallization and preliminary X-ray diffraction analysis of an oxidized state of Ohr from Xylella fastidiosa.

作者信息

de Oliveira Marcos Antonio, Netto Luis Eduardo Soares, Medrano Francisco Javier, Barbosa João Alexandre Ribeiro Gonçalves, Alves Simone Vidigal, Cussiol José Renato Rosa, Guimarães Beatriz Gomes

机构信息

Departamento de Biologia, Instituto de Biociências, Universidade de São Paulo, Rua do Matão 277, São Paulo SP, Brazil.

出版信息

Acta Crystallogr D Biol Crystallogr. 2004 Feb;60(Pt 2):337-9. doi: 10.1107/S0907444903026799. Epub 2004 Jan 23.

Abstract

Xylella fastidiosa organic hydroperoxide-resistance protein (Ohr) is a dithiol-dependent peroxidase that is widely conserved in several pathogenic bacteria with high affinity for organic hydroperoxides. The protein was crystallized using the hanging-drop vapour-diffusion method in the presence of PEG 4000 as precipitant after treatment with organic peroxide (t-butyl hydroperoxide). X-ray diffraction data were collected to a maximum resolution of 1.8 A using a synchrotron-radiation source. The crystal belongs to the hexagonal space group P6(5)22, with unit-cell parameters a = b = 87.66, c = 160.28 A. The crystal structure was solved by molecular-replacement methods. The enzyme has a homodimeric quaternary structure similar to that observed for its homologue from Pseudomonas aeruginosa, but differs from the previous structure as the active-site residue Cys61 is oxidized. Structure refinement is in progress.

摘要

木质部难养菌有机氢过氧化物抗性蛋白(Ohr)是一种依赖二硫醇的过氧化物酶,在几种致病细菌中广泛保守,对有机氢过氧化物具有高亲和力。在用有机过氧化物(叔丁基过氧化氢)处理后,采用悬滴气相扩散法,以聚乙二醇4000作为沉淀剂,使该蛋白结晶。使用同步辐射源收集X射线衍射数据,最大分辨率为1.8 Å。该晶体属于六方空间群P6(5)22,晶胞参数a = b = 87.66,c = 160.28 Å。通过分子置换法解析了晶体结构。该酶具有同二聚体四级结构,与其来自铜绿假单胞菌的同源物所观察到的结构相似,但与先前的结构不同,因为活性位点残基Cys61被氧化。结构精修正在进行中。

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