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小立碗藓中富含甘氨酸的RNA结合蛋白cDNA的克隆与特性分析

Cloning and characterization of glycine-rich RNA-binding protein cDNAs in the moss Physcomitrella patens.

作者信息

Nomata Tsuyoshi, Kabeya Yukihiro, Sato Naoki

机构信息

Department of Molecular Biology, Faculty of Science, Saitama University, Saitama, Saitama Prefecture, 338-8570 Japan.

出版信息

Plant Cell Physiol. 2004 Jan;45(1):48-56. doi: 10.1093/pcp/pch005.

Abstract

We isolated three cDNAs for the genes PpGRP1, PpGRP2 and PpGRP3 that encode glycine-rich RNA-binding proteins (GRPs) from Physcomitrella patens. Three full-length cDNA clones were isolated from a cDNA library prepared from poly(A)(+) RNA from 7-day-old protonemata of P. patens. They were named PpGRP1, PpGRP2 and PpGRP3, which encode putative polypeptides of 162, 178 and 155 residues, respectively. Preliminary genomic sequencing suggested that the positions of the three introns in the PpGRP3 gene are similar to those of introns in Arabidopsis GRP genes. PpGRP3 had a putative transit sequence. The PpGRP1-sGFP and PpGRP2-sGFP fusions were targeted to the cell nucleus, while PpGRP3-sGFP fusion was targeted to mitochondria. The level of these PpGRP transcripts as well as that of PpGRP proteins increased after cold treatment. Homoribopolymer RNA assay revealed that PpGRP3 protein show high affinity for poly(U) and poly(G). Results of phylogenetic analysis suggest that the nuclear and mitochondrial forms of GRP have been established early during the evolution of green plants.

摘要

我们从小立碗藓中分离出了编码富含甘氨酸的RNA结合蛋白(GRP)的PpGRP1、PpGRP2和PpGRP3基因的三个cDNA。从由7日龄小立碗藓原丝体的聚腺苷酸(poly(A))RNA制备的cDNA文库中分离出三个全长cDNA克隆。它们被命名为PpGRP1、PpGRP2和PpGRP3,分别编码162、178和155个残基的推定多肽。初步基因组测序表明,PpGRP3基因中三个内含子的位置与拟南芥GRP基因中内含子的位置相似。PpGRP3有一个推定的转运序列。PpGRP1-sGFP和PpGRP2-sGFP融合蛋白定位于细胞核,而PpGRP3-sGFP融合蛋白定位于线粒体。冷处理后,这些PpGRP转录本以及PpGRP蛋白的水平增加。同聚核糖核酸分析表明,PpGRP3蛋白对聚尿苷酸(poly(U))和聚鸟苷酸(poly(G))具有高亲和力。系统发育分析结果表明,GRP的核形式和线粒体形式在绿色植物进化早期就已确立。

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