Williams Kevin M, Rowan Carrie, Mitchell Jeremiah
Department of Chemistry, Western Kentucky University, Bowling Green, Kentucky 42101, USA.
Inorg Chem. 2004 Feb 9;43(3):1190-6. doi: 10.1021/ic035212m.
Molecular mechanics and dynamics calculations have been used in conjunction with experimental data to study the effects of amine ligand bulk on the formation of both guanine and methionine complexes with platinum diamine compounds. The AMBER force field has been supplemented with previous modifications [Yao; et al. Inorg. Chem. 1994, 33, 6061-6077. Cerasino; et al. Inorg. Chem. 1997, 36, 6070-6079] and has been further modified to include parameters for platinum bound to the sulfur atom of methionine. Molecular mechanics calculations with this modified AMBER force field have suggested that a platinum complex with two sulfur-bound methionine ligands and a bulky diamine ligand (N,N,N',N'-tetramethylethylenediamine, Me(4)en) would have severe interligand clashes; such interligand clashes are less pronounced in bis(9-ethylguanine) complexes. Consistent with these observations, NMR studies with Pt(Me(4)en)(D(2)O)(2) have indicated that guanine 5'-monophosphate reacts in a 2:1 guanine:platinum ratio while both methionine and N-acetylmethionine react with only a 1:1 stoichiometry. Methionine forms a chelate via the sulfur and nitrogen atoms whereas N-acetylmethionine forms a chelate via the sulfur and oxygen atoms. The oxygen of the latter chelate can be displaced by the addition of guanosine 5'-monophosphate, although complete displacement of the N-acetylmethionine was not observed.
分子力学和动力学计算已与实验数据相结合,用于研究胺配体体积对鸟嘌呤和蛋氨酸与二胺铂化合物形成配合物的影响。AMBER力场已在先前修改的基础上进行了补充[Yao等人,《无机化学》,1994年,第33卷,6061 - 6077页。Cerasino等人,《无机化学》,1997年,第36卷,6070 - 6079页],并进一步修改以纳入与蛋氨酸硫原子结合的铂的参数。使用这种修改后的AMBER力场进行的分子力学计算表明,具有两个硫键合蛋氨酸配体和一个体积较大的二胺配体(N,N,N',N'-四甲基乙二胺,Me(4)en)的铂配合物会存在严重的配体间冲突;这种配体间冲突在双(9-乙基鸟嘌呤)配合物中不太明显。与这些观察结果一致,对Pt(Me(4)en)(D(2)O)(2)的核磁共振研究表明,鸟嘌呤5'-单磷酸以2:1的鸟嘌呤:铂比例反应,而蛋氨酸和N-乙酰蛋氨酸都仅以1:1的化学计量比反应。蛋氨酸通过硫和氮原子形成螯合物,而N-乙酰蛋氨酸通过硫和氧原子形成螯合物。尽管未观察到N-乙酰蛋氨酸的完全取代,但加入鸟苷5'-单磷酸可使后者螯合物的氧被取代。