González Maykel Pérez, Díaz Humberto González, Cabrera Miguel Angel, Ruiz Reinaldo Molina
Department of Drug Design, Chemical Bioactives Center, Central University of Las Villas, Santa Clara 54830, Cuba.
Bioorg Med Chem. 2004 Feb 15;12(4):735-44. doi: 10.1016/j.bmc.2003.11.028.
The TOPological Substructural MOlecular DEsign (TOPS-MODE) has been successfully used in order to explain the toxicity in the Tetrahymena pyriformis on a large data set. The obtained models for the training set had good statistical parameters (R(2)=0.72-0.81, p<0.05) an also the prediction power of the models found was adequate (Q(2)=0.70-0.80). A detailed study of the influence of variable numbers in the equation and the statistical outliers was carried out; leading to a good final model with a better physicochemical interpretation than the rest of the published models. Only two molecular descriptors codifying dipolar and hydrophobic features were introduced. Finally, the fragment contributions to the toxicity prediction evidenced the powerful of this topological approach.
拓扑子结构分子设计(TOPS-MODE)已成功用于解释大量数据集对梨形四膜虫的毒性。训练集获得的模型具有良好的统计参数(R(2)=0.72 - 0.81,p<0.05),并且所发现模型的预测能力也足够(Q(2)=0.70 - 0.80)。对等式中变量数量的影响和统计异常值进行了详细研究;得到了一个比其他已发表模型具有更好物理化学解释的良好最终模型。仅引入了两个编码偶极和疏水特征的分子描述符。最后,片段对毒性预测的贡献证明了这种拓扑方法的强大之处。