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可变的3'剪接受体位点调节玉米青铜1-突变体13等位基因衍生等位基因中的酶活性。

Alternative 3' splice acceptor sites modulate enzymic activity in derivative alleles of the maize bronze1-mutable 13 allele.

作者信息

Okagaki R J, Sullivan T D, Schiefelbein J W, Nelson O E

机构信息

Laboratory of Genetics, University of Wisconsin, Madison 53706.

出版信息

Plant Cell. 1992 Nov;4(11):1453-62. doi: 10.1105/tpc.4.11.1453.

DOI:10.1105/tpc.4.11.1453
PMID:1477558
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC160232/
Abstract

The defective Suppressor-mutator (dSpm)-induced allele bronze1-mutable 13 (bz1-m13) and many of its derivative alleles are leaky mutants with measurable levels of flavonol O3-glucosyltransferase activity. This activity results from splicing at acceptor site-1, one of two cryptic 3' splice sites within the dSpm insertion in bz1-m13. In this study, splicing in bz1-m13 change-in-state (CS) alleles CS-3 and CS-64 was shown to be altered from bz1-m13; previous work found altered splicing in CS-9. CS-64 is a null allele and lacks the acceptor site-1-spliced transcript because this site is deleted. CS-3 and CS-9 had increased levels of the acceptor site-1 transcript relative to bz1-m13 and increased enzymic activities. A deletion in CS-9 altered splicing by eliminating acceptor site-2. Both acceptor sites were intact in CS-3, but a deletion removed most of a 275-bp GC-rich sequence in dSpm. This suggests that GC-rich sequences affect splicing and is consistent with models postulating a role for AU content in the splicing of plant introns. Splicing does not necessarily occur, however, at the junction of AU-rich intron sequences and GC-rich exon sequences.

摘要

缺陷抑制突变体(dSpm)诱导的等位基因青铜1-可变体13(bz1-m13)及其许多衍生等位基因是渗漏突变体,具有可测量水平的黄酮醇O3-葡萄糖基转移酶活性。这种活性源于在受体位点-1处的剪接,受体位点-1是bz1-m13中dSpm插入片段内两个隐蔽的3'剪接位点之一。在本研究中,bz1-m13状态改变(CS)等位基因CS-3和CS-64的剪接被证明与bz1-m13不同;先前的研究发现CS-9中存在剪接改变。CS-64是一个无效等位基因,缺乏受体位点-1剪接的转录本,因为该位点被删除了。相对于bz1-m13,CS-3和CS-9中受体位点-1转录本的水平增加,酶活性也增加。CS-9中的一个缺失通过消除受体位点-2改变了剪接。CS-3中的两个受体位点都是完整的,但一个缺失去除了dSpm中大部分275 bp富含GC的序列。这表明富含GC的序列影响剪接,并且与假设AU含量在植物内含子剪接中起作用的模型一致。然而,剪接不一定发生在富含AU的内含子序列和富含GC的外显子序列的交界处。

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本文引用的文献

1
Deletions in a dspm insert in a maize bronze-1 allele alter RNA processing and gene expression.玉米 Bronze-1 等位基因中的 dspm 插入缺失改变了 RNA 加工和基因表达。
Genetics. 1989 Jul;122(3):695-703. doi: 10.1093/genetics/122.3.695.
2
Controlling element-induced alterations in UDPglucose:flavonoid glucosyltransferase, the enzyme specified by the bronze locus in maize.控制元件诱导的UDP葡萄糖:类黄酮葡萄糖基转移酶的变化,该酶由玉米青铜基因座所决定。
Proc Natl Acad Sci U S A. 1977 Dec;74(12):5623-7. doi: 10.1073/pnas.74.12.5623.
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Molecular identification and isolation of the Waxy locus in maize.玉米蜡质基因座的分子鉴定与分离
Cell. 1983 Nov;35(1):225-33. doi: 10.1016/0092-8674(83)90225-8.
4
Identification of two distinct regulatory regions adjacent to the human beta-interferon gene.鉴定出与人类β-干扰素基因相邻的两个不同调控区域。
Cell. 1983 Oct;34(3):865-79. doi: 10.1016/0092-8674(83)90544-5.
5
Nonconsensus branch-site sequences in the in vitro splicing of transcripts of mutant rabbit beta-globin genes.突变兔β-珠蛋白基因转录本体外剪接中的非一致性分支位点序列
Proc Natl Acad Sci U S A. 1985 Dec;82(24):8349-53. doi: 10.1073/pnas.82.24.8349.
6
Plant intron sequences: evidence for distinct groups of introns.植物内含子序列:内含子不同分组的证据
Nucleic Acids Res. 1988 Jul 25;16(14B):7159-76. doi: 10.1093/nar/16.14.7159.
7
Sequence of three bronze alleles of maize and correlation with the genetic fine structure.玉米三个青铜等位基因的序列及其与遗传精细结构的相关性。
Genetics. 1988 May;119(1):185-97. doi: 10.1093/genetics/119.1.185.
8
Nuclear pre-mRNA processing in plants: distinct modes of 3'-splice-site selection in plants and animals.植物中的核前体mRNA加工:植物和动物中3'剪接位点选择的不同模式。
Mol Cell Biol. 1988 May;8(5):2042-51. doi: 10.1128/mcb.8.5.2042-2051.1988.
9
Recombinant fragment assay for gene targetting based on the polymerase chain reaction.基于聚合酶链反应的基因靶向重组片段检测法。
Nucleic Acids Res. 1988 Sep 26;16(18):8887-903. doi: 10.1093/nar/16.18.8887.
10
RNA splicing permits expression of a maize gene with a defective Suppressor-mutator transposable element insertion in an exon.RNA剪接使得一个外显子中插入了缺陷型抑制子-突变体转座元件的玉米基因得以表达。
Proc Natl Acad Sci U S A. 1987 Aug;84(16):5863-7. doi: 10.1073/pnas.84.16.5863.