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240秒的循环相互作用稳定了大肠杆菌天冬氨酸转氨甲酰酶的T状态。

240s loop interactions stabilize the T state of Escherichia coli aspartate transcarbamoylase.

作者信息

Alam Neelima, Stieglitz Kimberly A, Caban Michael D, Gourinath Samudrala, Tsuruta Hiro, Kantrowitz Evan R

机构信息

Department of Chemistry, Boston College, Merkert Chemistry Center, Chestnut Hill, Massachusetts 02467, USA.

出版信息

J Biol Chem. 2004 May 28;279(22):23302-10. doi: 10.1074/jbc.M401637200. Epub 2004 Mar 10.

Abstract

Here the functional and structural importance of interactions involving the 240s loop of the catalytic chain for the stabilization of the T state of aspartate transcarbamoylase were tested by replacement of Lys-244 with Asn and Ala. For the K244A and K244N mutant enzymes, the aspartate concentration required to achieve half-maximal specific activity was reduced to 8.4 and 4.0 mm, respectively, as compared with 12.4 mM for the wild-type enzyme. Both mutant enzymes exhibited dramatic reductions in homotropic cooperativity and the ability of the heterotropic effectors to modulate activity. Small angle x-ray scattering studies showed that the unligated structure of the mutant enzymes, and the structure of the mutant enzymes ligated with N-phosphonacetyl-L-aspartate, were similar to that observed for the unligated and N-phosphonacetyl-L-aspartateligated wild-type enzyme. A saturating concentration of carbamoyl phosphate alone has little influence on the small angle x-ray scattering of the wild-type enzyme. However, carbamoyl phosphate was able to shift the structure of the two mutant enzymes dramatically toward R, establishing that the mutations had destabilized the T state of the enzyme. The x-ray crystal structure of K244N enzyme showed that numerous local T state stabilizing interactions involving 240s loop residues were lost. Furthermore, the structure established that the mutation induced additional alterations at the subunit interfaces, the active site, the relative position of the domains of the catalytic chains, and the allosteric domain of the regulatory chains. Most of these changes reflect motions toward the R state structure. However, the K244N mutation alone only changes local conformations of the enzyme to an R-like structure, without triggering the quaternary structural transition. These results suggest that loss of cooperativity and reduction in heterotropic effects is due to the dramatic destabilization of the T state of the enzyme by this mutation in the 240s loop of the catalytic chain.

摘要

在此,通过将赖氨酸-244替换为天冬酰胺和丙氨酸,测试了催化链240s环参与的相互作用对天冬氨酸转氨甲酰酶T态稳定性的功能和结构重要性。对于K244A和K244N突变酶,达到最大比活性一半时所需的天冬氨酸浓度分别降至8.4和4.0 mM,而野生型酶为12.4 mM。两种突变酶均表现出同向协同性的显著降低以及异向效应剂调节活性能力的降低。小角X射线散射研究表明,突变酶的未结合结构以及与N-膦酰基乙酰-L-天冬氨酸结合的突变酶结构,与未结合和N-膦酰基乙酰-L-天冬氨酸结合的野生型酶所观察到的结构相似。单独的饱和浓度氨甲酰磷酸对野生型酶的小角X射线散射影响很小。然而,氨甲酰磷酸能够使两种突变酶的结构显著向R态转变,表明这些突变使酶的T态不稳定。K244N酶的X射线晶体结构表明,涉及240s环残基的许多局部T态稳定相互作用丧失。此外,该结构表明突变在亚基界面、活性位点、催化链结构域的相对位置以及调节链的别构结构域诱导了额外的改变。这些变化大多反映了向R态结构的转变。然而,单独的K244N突变仅将酶的局部构象改变为类似R的结构,而不会触发四级结构转变。这些结果表明,协同性丧失和异向效应降低是由于催化链240s环中的这种突变使酶的T态显著不稳定所致。

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