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新颚类鸟类最古老分化的新核证据:ZENK(i)的系统发育效用

New nuclear evidence for the oldest divergence among neognath birds: the phylogenetic utility of ZENK (i).

作者信息

Chubb Alison L

机构信息

Museum of Vertebrate Zoology, University of California, 3101 Valley Life Sciences Building, Berkeley, CA 94720, USA.

出版信息

Mol Phylogenet Evol. 2004 Jan;30(1):140-51. doi: 10.1016/s1055-7903(03)00159-3.

Abstract

To date, there is little consensus concerning the phylogenetic relationships among neognath orders, which include all extant birds except ratites and tinamous. Different data sets, both molecular and morphologic, have yielded radically different and often unresolved ordinal topologies, especially within the neoaves clade. This lack of resolution and ongoing conflict indicates a need for additional phylogenetic characters to be applied to the question of higher-level avian phylogeny. In this study, sequences of a single-copy nuclear gene, ZENK, were used to reconstruct an ordinal-level phylogeny of neognath birds. Strong support was indicated for the oldest divergence within Neognathae; the chicken- and duck-like birds formed a clade that was sister to all other modern birds. In addition, many families of traditional taxonomic orders clustered together in the ZENK tree, indicating the gene's general phylogenetic reliability. However, within the neoaves clade, there was little support for relationships among orders, which is a result similar to all other recent molecular studies of higher-level avian phylogeny. This similarity among studies suggests the possibility of a rapid radiation of the major neoaves lineages. Despite the ongoing lack of neoaves resolution, ZENK's sequence divergence and base composition patterns indicate its general utility as a new phylogenetic marker for higher-level avian systematics.

摘要

迄今为止,对于新颚类鸟目(包括除平胸鸟和䳍形目鸟之外的所有现存鸟类)之间的系统发育关系,几乎没有达成共识。不同的数据集,包括分子数据和形态学数据,得出了截然不同且往往未得到解决的目级拓扑结构,尤其是在新鸟亚纲分支内。这种缺乏分辨率和持续存在的冲突表明,需要应用更多的系统发育特征来解决高级鸟类系统发育问题。在本研究中,单拷贝核基因ZENK的序列被用于重建新颚类鸟目的目级系统发育。新颚类中最古老的分化得到了有力支持;鸡形目和鸭形目鸟类形成了一个分支,是所有其他现代鸟类的姐妹群。此外,许多传统分类目的科在ZENK树中聚集在一起,表明该基因具有总体系统发育可靠性。然而,在新鸟亚纲分支内,目之间的关系几乎没有得到支持,这一结果与所有其他近期关于高级鸟类系统发育的分子研究相似。研究之间的这种相似性表明,主要新鸟亚纲谱系可能发生了快速辐射。尽管新鸟亚纲的分辨率仍然不足,但ZENK的序列差异和碱基组成模式表明,它作为高级鸟类系统学的一种新的系统发育标记具有普遍实用性。

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