Fermi G, Perutz M F, Williamson D, Stein P, Shih D T
M.R.C. Laboratory of Molecular Biology, Cambridge, U.K.
J Mol Biol. 1992 Aug 5;226(3):883-8. doi: 10.1016/0022-2836(92)90638-z.
Haemoglobin Aalborg (Gly74 (E18)beta----Arg) has a reduced oxygen affinity, in both the absence and the presence of organic phosphates; it has a raised affinity for organic phosphates, and it is moderately unstable. By contrast, haemoglobin Shepherds Bush (Gly74 (E18)beta----Asp) has an increased oxygen affinity in both the absence and the presence of organic phosphates, a diminished affinity for organic phosphates and is also unstable. We have determined the crystal structure of deoxyhaemoglobin Aalborg at 2.8 A resolution and compared it to the structures of deoxy- and oxyhaemoglobin A and of deoxyhaemoglobin Shepherds Bush. The guanidinium group of Arg74(E18)beta protrudes from the haem pocket and donates hydrogen bonds to the E and F helices. The carboxylate group of Asp74(E18)beta forms a hydrogen bond only with residue EF6 and is partially buried, which may be why haemoglobin Shepherds Bush appears to be more unstable than haemoglobin Aalborg. To discover why the latter has a low oxygen affinity, we superimposed the B, G and H helices of haemoglobin A, whose conformation is known to be unaffected by ligand binding, on those of haemoglobin Aalborg. This also brought helices E and the haems into superposition, but revealed a shift of the F helix of deoxyhaemoglobin Aalborg towards the EF-corner. This shift is opposite to that which occurs on ligand binding and on transition to the quaternary oxy-structure, and is linked to an increased tilt of the proximal histidine residue away from the haem axis. Since the relative positions of helices E and F and of the haem group are thought to be the main determinants of the changes in oxygen affinity, the shift of helix F may account for the reduced oxygen affinity of haemoglobin Aalborg. The shift may be due to a combination of steric and electrostatic effects introduced by the arginine residue's side-chain. The effects of the arginine and aspartate substitutions at position E18 beta on the 2,3-diphosphoglycerate affinity are equal and opposite. They can be quantitatively accounted for by the electrostatic attraction or repulsion by the oppositely charged side-chains.
奥尔堡血红蛋白(Gly74(E18)β→精氨酸)在有无有机磷酸盐存在的情况下,其氧亲和力均降低;它对有机磷酸盐的亲和力升高,且稳定性中等。相比之下,谢泼德布什血红蛋白(Gly74(E18)β→天冬氨酸)在有无有机磷酸盐存在的情况下,其氧亲和力均增加,对有机磷酸盐的亲和力降低,并且也不稳定。我们已确定脱氧奥尔堡血红蛋白的晶体结构,分辨率为2.8埃,并将其与脱氧和氧合血红蛋白A以及脱氧谢泼德布什血红蛋白的结构进行了比较。精氨酸74(E18)β的胍基从血红素口袋中突出,并与E和F螺旋形成氢键。天冬氨酸74(E18)β的羧基仅与EF6残基形成氢键,并且部分被掩埋,这可能就是谢泼德布什血红蛋白似乎比奥尔堡血红蛋白更不稳定的原因。为了弄清楚后者为何具有低氧亲和力,我们将已知其构象不受配体结合影响的血红蛋白A的B、G和H螺旋叠加在奥尔堡血红蛋白的相应螺旋上。这也使E螺旋和血红素处于叠加状态,但揭示出脱氧奥尔堡血红蛋白的F螺旋向EF角移动。这种移动与配体结合以及向四级氧结构转变时发生的移动相反,并且与近端组氨酸残基远离血红素轴的倾斜增加有关。由于E和F螺旋以及血红素基团的相对位置被认为是氧亲和力变化的主要决定因素,F螺旋的移动可能解释了奥尔堡血红蛋白氧亲和力降低的原因。这种移动可能是由精氨酸残基侧链引入的空间和静电效应共同导致的。E18β位精氨酸和天冬氨酸取代对2,3 - 二磷酸甘油酸亲和力的影响大小相等但方向相反。它们可以通过带相反电荷的侧链之间的静电吸引或排斥进行定量解释。