Kumar Devesh, De Visser Samuël P, Shaik Sason
Department of Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, Israel.
J Am Chem Soc. 2004 Apr 28;126(16):5072-3. doi: 10.1021/ja0318737.
The economy of dioxygen consumption by enzymes constitutes a fundamental problem in enzymatic chemistry (ref 1). Sometimes, the enzyme converts ALL the oxygen into water, without affecting the organic substrate, thereby acting as an "oxidase" (ref 1). Other times, the enzyme converts all the oxygen into water and causes desaturation in the substrate, thus exhibiting a mixed function as both "oxidase" and "dehydrogenase" (refs 2-5). The present paper describes density functional calculations demonstrating that the oxidase-dehydrogenase mixed activity occurs from the cationic intermediate species and requires electro-steric inhibition of the rebound process. Furthermore, the calculations reveal that the carbocation is formally nascent from an excited state of the active species of the enzyme (2Cpd I), in which the Fe=O moiety is singlet coupled as in the 1Deltag state of dioxygen! Thus, our results resolve an important mechanism and reveal the factors that underlie its observability.
酶对二氧消耗的经济性是酶化学中的一个基本问题(参考文献1)。有时,酶将所有氧气转化为水,而不影响有机底物,从而起到“氧化酶”的作用(参考文献1)。其他时候,酶将所有氧气转化为水并导致底物去饱和,因此表现出“氧化酶”和“脱氢酶”的混合功能(参考文献2 - 5)。本文描述了密度泛函计算,证明氧化酶 - 脱氢酶混合活性源于阳离子中间物种,并且需要对反弹过程进行电空间抑制。此外,计算结果表明碳正离子正式产生于酶活性物种(2Cpd I)的激发态,其中Fe = O部分如在单线态氧的1Δg态中那样是单重态耦合!因此,我们的结果解决了一个重要机制,并揭示了其可观察性背后的因素。