Yuan Chang, Xu Jiaqi, Wang Shun, Fang Ye-Guang, Tan Hongwei
Institute of New Materials & Industrial Technologies, Wenzhou University, Wenzhou 325024, China.
Key Laboratories of Theoretical and Computational Photochemistry, Ministry of Education, Beijing Normal University, Beijing 100875, China.
Int J Mol Sci. 2025 Feb 11;26(4):1526. doi: 10.3390/ijms26041526.
CYP199A4 is a cytochrome P450 and can catalyze the hydroxylation of 4-propionylbenzoic acid (4-pIBA) to generate α-hydroxyketone with high stereoselectivity. The F182L mutant of CYP199A4 (F182L-CYP199A4) has been shown to support the cleavage of the C-C bond between the carbonyl and hydroxyl groups of α-hydroxyketone, whereas wild-type CYP199A4 cannot. To uncover how the Phe182 regulates substrate reactivity, we conducted classical molecular dynamics (MD) and quantum mechanics/molecular mechanics (QM/MM) MD simulations on these systems. The results predicted that the formation of α-hydroxyketone preferentially led to the ()-enantiomer. Moreover, the findings revealed that the F182L-CYP199A4 facilitated the formation of a hydrogen bond between the α-hydroxyketone and the reactive peroxoanion (POA) species. This interaction stabilized the α-hydroxyketone near POA and promoted the subsequent C-C bond cleavage. The mechanism of α-hydroxyketone formation and the subsequent C-C bond cleavage were elucidated by employing the hybrid density functional theory (DFT). The α-hydroxyketone formation mechanism involved C-H hydroxylation of 4-pIBA with a rate-limiting energy barrier of 17.1 kcal/mol. The C-C bond cleavage of α-hydroxyketone catalyzed by F182L-CYP199A4 occurred via a radical attack mechanism.
CYP199A4是一种细胞色素P450,能够催化4-丙酰苯甲酸(4-pIBA)的羟基化反应,以高立体选择性生成α-羟基酮。已证明CYP199A4的F182L突变体(F182L-CYP199A4)能够支持α-羟基酮羰基和羟基之间碳-碳键的断裂,而野生型CYP199A4则不能。为了揭示苯丙氨酸182如何调节底物反应性,我们对这些系统进行了经典分子动力学(MD)和量子力学/分子力学(QM/MM)MD模拟。结果预测,α-羟基酮的形成优先产生()-对映体。此外,研究结果表明,F182L-CYP199A4促进了α-羟基酮与反应性过氧阴离子(POA)物种之间氢键的形成。这种相互作用使α-羟基酮在POA附近稳定,并促进了随后的碳-碳键断裂。通过采用杂化密度泛函理论(DFT)阐明了α-羟基酮的形成机制以及随后的碳-碳键断裂。α-羟基酮的形成机制涉及4-pIBA的C-H羟基化,限速能垒为17.1千卡/摩尔。F182L-CYP199A4催化的α-羟基酮碳-碳键断裂通过自由基攻击机制发生。