Roubinet Francis, Despiau Stéphanie, Calafell Francesc, Jin Fen, Bertranpetit Jaume, Saitou Naruya, Blancher Antoine
Laboratory of Molecular Immunology, Paul Sabatier University, Rangueil Hospital, 31403 Toulouse Cedex 4, France.
Transfusion. 2004 May;44(5):707-15. doi: 10.1111/j.1537-2995.2004.03346.x.
To date, at least 40 different alleles O have been characterized on the basis of exon 6 and exon 7 sequences but not always for intron 6.
Among 415 individuals, from four continents (Africa, Europe, South America, and Asia), studied for exon 6 and exon 7 sequences, we selected 46 individuals (of respective phenotypes O [39], AB [3], B [3], or A [1]) for sequencing 1800-bp amplicons spanning exon 6, intron 6, and exon 7. The amplicons were characterized either by direct sequencing or after cloning when required.
We defined 14 new intron 6 O allele sequences, including four recombinant alleles. Based on sequence comparison, a phylogenetic network was constructed. It confirmed recombinant allele origins and that most O alleles are derived by point mutations from the two worldwide distributed alleles O01 and O02.
Allele O phylogenetic analysis suggests that the most frequent silencing mutation (deletion of a G in exon 6) appeared once in human evolution in the ancient O02 allele lineage and that allele O01 resulted from an interallele exchange between O02 and A101. Assuming constancy of evolutionary rate, diversification of the representative alleles of the three human ABO lineages (A101, B101, and O02) was estimated at 4.5 to 6 million years ago.
迄今为止,基于第6外显子和第7外显子序列已鉴定出至少40种不同的O等位基因,但第6内含子的情况并非总是如此。
在对来自四大洲(非洲、欧洲、南美洲和亚洲)的415名个体进行第6外显子和第7外显子序列研究中,我们选择了46名个体(分别为O型[39名]、AB型[3名]、B型[3名]或A型[1名])对跨越第6外显子、第6内含子和第7外显子的1800 bp扩增子进行测序。扩增子通过直接测序或在需要时克隆后进行鉴定。
我们定义了14种新的第6内含子O等位基因序列,包括4种重组等位基因。基于序列比较构建了系统发育网络。它证实了重组等位基因的起源,并且大多数O等位基因是由两个全球分布的等位基因O01和O02通过点突变衍生而来。
等位基因O的系统发育分析表明,最常见的沉默突变(第6外显子中一个G的缺失)在人类进化过程中于古代O02等位基因谱系中出现过一次,并且等位基因O01是由O02和A101之间的等位基因间交换产生的。假设进化速率恒定,估计人类ABO三个谱系(A101、B101和O02)的代表性等位基因的多样化发生在450万至600万年前。