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对来自HapMap计划的更大SNP数据集的分析证实,ABO血型基因的现代人类A等位基因是B和O等位基因之间重组体的后代。

Analysis of a Larger SNP Dataset from the HapMap Project Confirmed That the Modern Human A Allele of the ABO Blood Group Genes Is a Descendant of a Recombinant between B and O Alleles.

作者信息

Itou Masaya, Sato Mitsuharu, Kitano Takashi

机构信息

Department of Biomolecular Functional Engineering, College of Engineering, Ibaraki University, 4-12-1 Nakanarusawa-cho, Hitachi 316-8511, Japan.

出版信息

Int J Evol Biol. 2013;2013:406209. doi: 10.1155/2013/406209. Epub 2013 Oct 29.

DOI:10.1155/2013/406209
PMID:24288652
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3830805/
Abstract

The human ABO blood group gene consists of three main alleles (A, B, and O) that encode a glycosyltransferase. The A and B alleles differ by two critical amino acids in exon 7, and the major O allele has a single nucleotide deletion (Δ261) in exon 6. Previous evolutionary studies have revealed that the A allele is the most ancient, B allele diverged from the A allele with two critical amino acid substitutions in exon 7, and the major O allele diverged from the A allele with Δ261 in exon 6. However, a recent phylogenetic network analysis study showed that the A allele of humans emerged through a recombination between the B and O alleles. In the previous study, a restricted dataset from only two populations was used. In this study, therefore, we used a large single nucleotide polymorphism (SNP) dataset from the HapMap Project. The results indicated that the A101-A201-O09 haplogroup was a recombinant lineage between the B and O haplotypes, containing the intact exon 6 from the B allele and the two critical A type sites in exon 7 from the major O allele. Its recombination point was assumed to be located just behind Δ261 in exon 6.

摘要

人类ABO血型基因由三个主要等位基因(A、B和O)组成,这些等位基因编码一种糖基转移酶。A等位基因和B等位基因在外显子7中有两个关键氨基酸不同,主要的O等位基因在外显子6中有一个单核苷酸缺失(Δ261)。先前的进化研究表明,A等位基因是最古老的,B等位基因通过外显子7中的两个关键氨基酸替换从A等位基因分化而来,主要的O等位基因通过外显子6中的Δ261从A等位基因分化而来。然而,最近一项系统发育网络分析研究表明,人类的A等位基因是通过B等位基因和O等位基因之间的重组产生的。在先前的研究中,仅使用了来自两个群体的有限数据集。因此,在本研究中,我们使用了来自HapMap计划的大型单核苷酸多态性(SNP)数据集。结果表明,A101 - A201 - O09单倍型组是B和O单倍型之间的重组谱系,包含来自B等位基因的完整外显子6和来自主要O等位基因外显子7中的两个关键A类型位点。其重组点假定位于外显子6中Δ261之后。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/a52a8291f3c9/IJEB2013-406209.008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/ae0d514fb0cd/IJEB2013-406209.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/91acc1b57450/IJEB2013-406209.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/118748809600/IJEB2013-406209.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/f5ae5a09a182/IJEB2013-406209.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/f73d6ae4411a/IJEB2013-406209.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/9acc4f6498e3/IJEB2013-406209.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/8f679db23abc/IJEB2013-406209.007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/a52a8291f3c9/IJEB2013-406209.008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/ae0d514fb0cd/IJEB2013-406209.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/91acc1b57450/IJEB2013-406209.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/118748809600/IJEB2013-406209.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/f5ae5a09a182/IJEB2013-406209.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/f73d6ae4411a/IJEB2013-406209.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/9acc4f6498e3/IJEB2013-406209.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/8f679db23abc/IJEB2013-406209.007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54ad/3830805/a52a8291f3c9/IJEB2013-406209.008.jpg

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本文引用的文献

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Proc Natl Acad Sci U S A. 2012 Nov 6;109(45):18493-8. doi: 10.1073/pnas.1210603109. Epub 2012 Oct 22.
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The PNarec method for detection of ancient recombinations through phylogenetic network analysis.通过系统发生网络分析检测古代重组的 PNarec 方法。
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The functional A allele was resurrected via recombination in the human ABO blood group gene.
功能性 A 等位基因通过人类 ABO 血型基因重组复活。
Mol Biol Evol. 2012 Jul;29(7):1791-6. doi: 10.1093/molbev/mss021. Epub 2012 Jan 27.
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Evolution of the O alleles of the human ABO blood group gene.人类ABO血型基因O等位基因的演变
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