Serre Valérie, Penverne Bernadette, Souciet Jean-Luc, Potier Serge, Guy Hedeel, Evans David, Vicart Patrick, Hervé Guy
Laboratoire de Biochimie des Signaux Régulateurs Cellulaires et Moléculaires, FRE 2621 CNRS and Université Pierre et Marie Curie, 96 Bd Raspail 75006 Paris, France.
BMC Biochem. 2004 May 5;5:6. doi: 10.1186/1471-2091-5-6.
The S. cerevisiae carbamylphosphate synthetase - aspartate transcarbamylase multifunctional protein catalyses the first two reactions of the pyrimidine pathway. In this organism, these two reactions are feedback inhibited by the end product UTP. In the present work, the mechanisms of these integrated inhibitions were studied.
The results obtained show that the inhibition is competitive in the case of carbamylphosphate synthetase and non-competitive in the case of aspartate transcarbamylase. They also identify the substrate whose binding is altered by this nucleotide and the step of the carbamylphosphate synthetase reaction which is inhibited. Furthermore, the structure of the domains catalyzing these two reactions were modelled in order to localize the mutations which, specifically, alter the aspartate transcarbamylase sensitivity to the feedback inhibitor UTP. Taken together, the results make it possible to propose a model for the integrated regulation of the two activities of the complex. UTP binds to a regulatory site located in the vicinity of the carbamylphosphate synthetase catalytic subsite which catalyzes the third step of this enzyme reaction. Through a local conformational change, this binding decreases, competitively, the affinity of this site for the substrate ATP. At the same time, through a long distance signal transmission process it allosterically decreases the affinity of the aspartate transcarbamylase catalytic site for the substrate aspartate.
This investigation provides informations about the mechanisms of allosteric inhibition of the two activities of the CPSase-ATCase complex. Although many allosteric monofunctional enzymes were studied, this is the first report on integrated allosteric regulation in a multifunctional protein. The positions of the point mutations which specifically abolish the sensitivity of aspartate transcarbamylase to UTP define an interface between the carbamylphosphate synthetase and aspartate transcarbamylase domains, through which the allosteric signal for the regulation of aspartate transcarbamylase must be propagated.
酿酒酵母氨甲酰磷酸合成酶 - 天冬氨酸转氨甲酰酶多功能蛋白催化嘧啶途径的前两个反应。在这种生物体中,这两个反应受到终产物尿苷三磷酸(UTP)的反馈抑制。在本研究中,对这些综合抑制的机制进行了研究。
所得结果表明,对于氨甲酰磷酸合成酶,抑制作用是竞争性的;对于天冬氨酸转氨甲酰酶,抑制作用是非竞争性的。它们还确定了其结合因该核苷酸而改变的底物以及氨甲酰磷酸合成酶反应中被抑制的步骤。此外,对催化这两个反应的结构域进行了建模,以便定位那些特异性改变天冬氨酸转氨甲酰酶对反馈抑制剂UTP敏感性的突变。综合来看,这些结果使得能够提出一个关于该复合物两种活性综合调节的模型。UTP结合到位于氨甲酰磷酸合成酶催化亚位点附近的一个调节位点,该亚位点催化该酶反应的第三步。通过局部构象变化,这种结合竞争性地降低了该位点对底物三磷酸腺苷(ATP)的亲和力。同时,通过长距离信号传递过程,它变构地降低了天冬氨酸转氨甲酰酶催化位点对底物天冬氨酸的亲和力。
本研究提供了关于氨甲酰磷酸合成酶 - 天冬氨酸转氨甲酰酶复合物两种活性变构抑制机制的信息。尽管对许多变构单功能酶进行了研究,但这是关于多功能蛋白中综合变构调节的首次报道。特异性消除天冬氨酸转氨甲酰酶对UTP敏感性的点突变位置定义了氨甲酰磷酸合成酶和天冬氨酸转氨甲酰酶结构域之间的一个界面,调节天冬氨酸转氨甲酰酶的变构信号必须通过该界面进行传递。