Sneyd J, Falcke M, Dufour J-F, Fox C
Department of Mathematics, University of Auckland, Auckland, New Zealand.
Prog Biophys Mol Biol. 2004 Jun-Jul;85(2-3):121-40. doi: 10.1016/j.pbiomolbio.2004.01.013.
The inositol (1,4,5)-trisphosphate receptor (IPR) plays a crucial role in calcium dynamics in a wide range of cell types, and is often a central feature in quantitative models of calcium oscillations and waves. We compare three mathematical models of the IPR, fitting each of them to the same data set to determine ranges for the parameter values. Each of the fits indicates that fast activation of the receptor, followed by slow inactivation, is an important feature of the model, and also that the speed of inositol trisphosphate IP3 binding cannot necessarily be assumed to be faster than Ca2+ activation. In addition, the model which assumed saturating binding rates of Ca2+ to the IPR demonstrated the best fit. However, lack of convergence in the fitting procedure indicates that responses to step increases of Ca2+ and IP3 provide insufficient data to determine the parameters unambiguously in any of the models.
肌醇(1,4,5)-三磷酸受体(IPR)在多种细胞类型的钙动力学中起着关键作用,并且常常是钙振荡和波动定量模型的核心特征。我们比较了IPR的三种数学模型,将它们分别拟合到同一数据集以确定参数值的范围。每次拟合都表明,受体的快速激活,随后是缓慢失活,是模型的一个重要特征,并且还表明肌醇三磷酸IP3结合的速度不一定比Ca2+激活快。此外,假设Ca2+与IPR的结合速率达到饱和的模型拟合效果最佳。然而,拟合过程中缺乏收敛性表明,对Ca2+和IP3阶跃增加的响应提供的数据不足以在任何模型中明确确定参数。