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铁氢化酶活性位点的密度泛函理论研究。关于氧化还原态和配体硬度对与[2Fe](H)亚簇相关配合物的结构和电子性质影响的系统研究。

Density functional theory investigation of the active site of Fe-hydrogenases. systematic study of the effects of redox state and ligands hardness on structural and electronic properties of complexes related to the [2Fe](H) subcluster.

作者信息

Bruschi Maurizio, Fantucci Piercarlo, De Gioia Luca

机构信息

Department of Environmental Science, University of Milano-Bicocca, Piazza della Scienza 1, 20126-Milan, Italy.

出版信息

Inorg Chem. 2004 Jun 14;43(12):3733-41. doi: 10.1021/ic035326y.

Abstract

Density functional theory has been used to investigate complexes related to the 2Fe subcluster of [Fe]-hydrogenases. In particular, the effects on structural and electronic properties of redox state and ligands with different sigma-donor pi-acceptor character, which replace the cysteine residue coordinated to the 2Fe subcluster in the enzyme, have been investigated. Results show that the structural and electronic properties of fully reduced Fe(I)Fe(I) complexes are strongly affected by the nature of the ligand L, and in particular, a progressive rotation of the Fe(d)(CO)(2)(CN) group, with a CO ligand moving from a terminal to a semibridged position, is observed going from the softest to the hardest ligand. For the partially oxidized Fe(I)Fe(II) complexes, two isomers of similar stability, characterized either by a CO ligand in a terminal or bridged position, have been observed. The switching between the two forms is associated with a spin and charge transfer between the two iron atoms, a feature that could be relevant in the catalytic mechanism of dihydrogen activation. The structure of the fully oxidized Fe(II)Fe(II) models is extremely dependent on the nature of the L ligand; one CO group coordinated to Fe(d) switches from terminal to bridging position going from complexes characterized by neutral to anionic L ligands.

摘要

密度泛函理论已被用于研究与[Fe]-氢化酶的2Fe亚簇相关的配合物。特别地,研究了氧化还原态和具有不同σ供体π受体性质的配体对结构和电子性质的影响,这些配体取代了酶中与2Fe亚簇配位的半胱氨酸残基。结果表明,完全还原的Fe(I)Fe(I)配合物的结构和电子性质受配体L性质的强烈影响,特别是,观察到从最软配体到最硬配体时,Fe(d)(CO)(2)(CN)基团会逐渐旋转,其中一个CO配体从端基位置移动到半桥连位置。对于部分氧化的Fe(I)Fe(II)配合物,观察到两种稳定性相似的异构体,其特征分别是CO配体处于端基或桥连位置。两种形式之间的转换与两个铁原子之间的自旋和电荷转移有关,这一特征可能与二氢活化的催化机制相关。完全氧化的Fe(II)Fe(II)模型的结构极其依赖于L配体的性质;与Fe(d)配位的一个CO基团从端基位置切换到桥连位置,这取决于配合物中L配体是中性还是阴离子性质。

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