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同域嗜色菌对不同氧化还原条件的适应性:功能相似的硫细菌共存的一种机制

Adaptation of sympatric Achromatium spp. to different redox conditions as a mechanism for coexistence of functionally similar sulphur bacteria.

作者信息

Gray Neil D, Comaskey Daria, Miskin Ian P, Pickup Roger W, Suzuki Keiko, Head Ian M

机构信息

School of Civil Engineering and Geosciences, University of Newcastle, Newcastle upon Tyne, NE1 7RU, UK.

出版信息

Environ Microbiol. 2004 Jul;6(7):669-77. doi: 10.1111/j.1462-2920.2004.00607.x.

Abstract

Changes in the abundance of sympatric Achromatium spp. in response to the artificial manipulation of redox conditions in sediment microcosms was determined by fluorescence in situ hybridization (FISH). Adaptation to different redox conditions was shown to be one mechanism that supported the coexistence of functionally similar Achromatium spp. In sediment microcosms, in which the overlying water was oxygenated, Achromatium community size and composition remained unchanged over time. However, imposition of anoxic conditions induced changes in community structure. Anoxia caused a reduction in the relative abundance of Achromatium sp. RY8 (72 +/- 4% to 49 +/- 2%) and an increase in Achromatium sp. RY5 (19 +/- 5% to 32 +/- 3%) and a newly identified Achromatium sp., RYKS (14 +/- 4% to 27 +/- 2%). In anoxic microcosms supplemented with a single addition of nitrate at different initial concentrations the relative decline in Achromatium sp. RY8 was dependent on the initial nitrate concentration. In these experiments nitrate was rapidly removed. In contrast, when high levels of nitrate were maintained by periodic replacement of the overlying water with nitrate supplemented anoxic water, the composition of the Achromatium community remained stable over time. This suggested that all of the coexisting Achromatium spp. are obligate or facultative anaerobes, but, Achromatium sp. RY8 was more sensitive to sediment redox conditions than the other Achromatium species. Given the heterogeneous nature of sedimentary environments, redox-related niche differentiation may promote coexistence of sympatric Achromatium spp.

摘要

通过荧光原位杂交(FISH)确定了同域性无色菌属物种丰度对沉积物微观世界中氧化还原条件人工调控的响应。适应不同的氧化还原条件被证明是支持功能相似的无色菌属物种共存的一种机制。在沉积物微观世界中,上覆水被充氧,无色菌群落大小和组成随时间保持不变。然而,施加缺氧条件会引起群落结构变化。缺氧导致无色菌属RY8菌株的相对丰度降低(从72±4%降至49±2%),无色菌属RY5菌株(从19±5%增至32±3%)和新鉴定的无色菌属RYKS菌株(从14±4%增至27±2%)的相对丰度增加。在以不同初始浓度单次添加硝酸盐的缺氧微观世界中,无色菌属RY8菌株的相对减少取决于初始硝酸盐浓度。在这些实验中硝酸盐被迅速去除。相反,当通过用补充硝酸盐的缺氧水定期替换上覆水来维持高浓度硝酸盐时,无色菌群落组成随时间保持稳定。这表明所有共存的无色菌属物种都是专性或兼性厌氧菌,但无色菌属RY8菌株比其他无色菌物种对沉积物氧化还原条件更敏感。鉴于沉积环境的异质性,与氧化还原相关的生态位分化可能促进同域性无色菌属物种的共存。

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