Katoh Masuko, Katoh Masaru
M and M Medical BioInformatics, Narashino 275-0022, Japan.
Int J Oncol. 2004 Jul;25(1):225-30.
TP53 gene, encoding tumor protein P53, is frequently inactivated in various types of human cancer, including colorectal, lung, and gastric cancer. Cancer cells with TP53 mutation acquire malignant potentials, such as selective growth advantage, genomic instability, resistance to apoptosis, and promotion of angiogenesis. U33271 partial cDNA isolated from HPV-18 E6/E7 immortalized keratinocytes is derived from one of P53-traget genes. Here, we identified and characterized the TP53I5 (tumor protein P53 inducible protein 5) gene corresponding to U33271 partial cDNA by using bioinformatics. FLJ23270 (AK026923.1) was the representative human TP53I5 cDNA. TP53I5 gene, consisting of 23 exons, was located at human chromosome 11p15.5. TP53I5 mRNA was expressed in human colorectal, lung, and breast cancer. IMAGE5352905 (BC025477.1) and IMAGE6508837 (NM_178381.2) were aberrant mouse Tp53i5 cDNAs with multiple frameshifts due to retention of intronic sequences. Complete coding sequence of mouse Tp53i5 cDNA was determined by assembling nucleotide positions 1-1213, 1293-1740, 1745-2045, and 2071-3088 of BC025477.1. Tp53i5 gene was located at mouse chromosome 7F5. Human TP53I5 (782 aa) and mouse Tp53i5 (747 aa), showing 71.1% total-amino-acid identity, were eight-transmembrane proteins with N- and C-terminal tails facing the cytoplasm. TP53I5 orthologs were homologous to TMEM16A (FLJ10261 or ORAOV2), TMEM16B, TMEM16C, TMEM16D, TMEM16E and TMEM16F with the TM16H1, TM16H2, and TM16H3 domains. TP53I5 was identified as a novel member of the TMEM16 family based on membrane topology and TM16H1-3 domains. This is the first report on the human TP53I5 and mouse Tp53i5 genes.
TP53基因编码肿瘤蛋白P53,在包括结直肠癌、肺癌和胃癌在内的多种人类癌症中经常失活。携带TP53突变的癌细胞具有恶性潜能,如选择性生长优势、基因组不稳定、抗凋亡能力以及促进血管生成。从HPV - 18 E6/E7永生化角质形成细胞中分离出的U33271部分cDNA源自P53靶基因之一。在此,我们通过生物信息学鉴定并表征了与U33271部分cDNA相对应的TP53I5(肿瘤蛋白P53诱导蛋白5)基因。FLJ23270(AK026923.1)是具有代表性的人类TP53I5 cDNA。TP53I5基因由23个外显子组成,位于人类染色体11p15.5。TP53I5 mRNA在人类结直肠癌、肺癌和乳腺癌中表达。IMAGE5352905(BC025477.1)和IMAGE6508837(NM_178381.2)是异常的小鼠Tp53i5 cDNA,由于内含子序列的保留而具有多个移码。通过组装BC025477.1的核苷酸位置1 - 1213、1293 - 1740、1745 - 2045和2071 - 3088确定了小鼠Tp53i5 cDNA的完整编码序列。Tp53i5基因位于小鼠染色体7F5。人类TP53I5(782个氨基酸)和小鼠Tp53i5(747个氨基酸)的总氨基酸同一性为71.1%,是具有面向细胞质的N端和C端尾巴的八跨膜蛋白。TP53I5直系同源物与具有TM16H1、TM16H2和TM16H3结构域的TMEM16A(FLJ10261或ORAOV2)、TMEM16B、TMEM16C、TMEM16D、TMEM16E和TMEM16F同源。基于膜拓扑结构和TM16H1 - 3结构域,TP53I5被鉴定为TMEM16家族的一个新成员。这是关于人类TP53I5和小鼠Tp53i5基因的首次报道。