Experimental Ophthalmology, Regensburg University Medical Center, Regensburg, Germany.
BMC Evol Biol. 2010 Oct 21;10:319. doi: 10.1186/1471-2148-10-319.
The anoctamin family of transmembrane proteins are found in all eukaryotes and consists of 10 members in vertebrates. Ano1 and ano2 were observed to have Ca2+ activated Cl- channel activity. Recent findings however have revealed that ano6, and ano7 can also produce chloride currents, although with different properties. In contrast, ano9 and ano10 suppress baseline Cl- conductance when co-expressed with ano1 thus suggesting that different anoctamins can interfere with each other. In order to elucidate intrinsic functional diversity, and underlying evolutionary mechanism among anoctamins, we performed comprehensive bioinformatics analysis of anoctamin gene family.
Our results show that anoctamin protein paralogs evolved from several gene duplication events followed by functional divergence of vertebrate anoctamins. Most of the amino acid replacements responsible for the functional divergence were fixed by adaptive evolution and this seem to be a common pattern in anoctamin gene family evolution. Strong purifying selection and the loss of many gene duplication products indicate rigid structure-function relationships among anoctamins.
Our study suggests that anoctamins have evolved by series of duplication events, and that they are constrained by purifying selection. In addition we identified a number of protein domains, and amino acid residues which contribute to predicted functional divergence. Hopefully, this work will facilitate future functional characterization of the anoctamin membrane protein family.
跨膜蛋白的 anoctamin 家族存在于所有真核生物中,脊椎动物中有 10 个成员。Ano1 和 ano2 被观察到具有 Ca2+ 激活的 Cl- 通道活性。然而,最近的研究发现 ano6 和 ano7 也可以产生氯离子电流,尽管具有不同的特性。相比之下,ano9 和 ano10 与 ano1 共表达时会抑制基线 Cl- 电导,这表明不同的 anoctamins 可以相互干扰。为了阐明 anoctamins 之间的固有功能多样性和潜在的进化机制,我们对 anoctamin 基因家族进行了全面的生物信息学分析。
我们的结果表明,anoctamin 蛋白的旁系同源物是由几个基因复制事件进化而来的,随后脊椎动物 anoctamins 发生了功能分化。导致功能分化的大多数氨基酸替换是由适应性进化固定的,这似乎是 anoctamin 基因家族进化的一个共同模式。强烈的纯化选择和许多基因复制产物的丢失表明 anoctamins 之间存在刚性的结构-功能关系。
我们的研究表明 anoctamins 是通过一系列的复制事件进化而来的,它们受到纯化选择的限制。此外,我们确定了一些对预测功能分化有贡献的蛋白质结构域和氨基酸残基。希望这项工作将有助于未来对 anoctamin 膜蛋白家族的功能特征进行研究。