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所有菌丝尖端的协同调控产生真菌子实体结构:利用菌丝生长新数学模型生成的计算机可视化实验。

Concerted regulation of all hyphal tips generates fungal fruit body structures: experiments with computer visualizations produced by a new mathematical model of hyphal growth.

作者信息

Meskauskas Audrius, McNulty Liam J, Moore David

机构信息

School of Biological Sciences, Stopford Building, University of Manchester, Oxford Road, Manchester M13 9PT, UK.

出版信息

Mycol Res. 2004 Apr;108(Pt 4):341-53. doi: 10.1017/s0953756204009670.

Abstract

Filamentous hyphal growth is inherently suited to kinetic analysis, and in many respects the fungal mycelium can be viewed as a very mechanical biological system, which lends itself to mathematical modelling. The mathematics of hyphal tip extension growth are well-established. However, even though a hyphal growth equation can be written with confidence, and we have a good understanding of the effects of tropisms on growth, it is not easy to form a mental picture of the behaviour of large populations of hyphal tips. What is required, and what we believe we have produced, is a mathematical model that is sufficiently sophisticated to produce a realistic visualization of fungal hyphal growth. This provides us with a cyberfungus that can be used for experimentation on the theoretical rules that might govern hyphal patterning, hyphal interactions, and tissue formation and organ development by actually visualizing the virtual hyphal growth patterns that result from different regulatory scenarios. From a series of model experiments the most significant observation is that complex fungal fruit body shapes can be simulated by applying the same regulatory functions to all of the growth points active in a structure at any specific time. No global control of fruit body geometry is necessary. No localized regulation is necessary. The shape of the fruit body emerges from the concerted response of the entire population of hyphal tips, in the same way, to the same signals.

摘要

丝状菌丝生长本质上适合进行动力学分析,在许多方面,真菌菌丝体可被视为一个非常机械的生物系统,这使其适合进行数学建模。菌丝顶端延伸生长的数学原理已得到充分确立。然而,尽管可以自信地写出菌丝生长方程,并且我们对向性对生长的影响有很好的理解,但要在脑海中形成大量菌丝顶端行为的图像并不容易。我们所需要的,也是我们认为自己已经产生的,是一个足够复杂的数学模型,能够对真菌菌丝生长进行逼真的可视化。这为我们提供了一个虚拟真菌,可用于通过实际可视化不同调控场景下产生的虚拟菌丝生长模式,来对可能支配菌丝模式形成、菌丝相互作用以及组织形成和器官发育的理论规则进行实验。从一系列模型实验中得出的最显著观察结果是,通过对在任何特定时间结构中活跃的所有生长点应用相同的调控功能,可以模拟出复杂的真菌子实体形状。无需对子实体几何形状进行全局控制。无需进行局部调控。子实体的形状以相同的方式从整个菌丝顶端群体对相同信号的协同反应中显现出来。

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