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蛋白质中1型铜位点相对还原电位的决定因素。

Determinants of the relative reduction potentials of type-1 copper sites in proteins.

作者信息

Li Hui, Webb Simon P, Ivanic Joseph, Jensen Jan H

机构信息

Department of Chemistry, The University of Iowa, Iowa City, Iowa 52242, USA.

出版信息

J Am Chem Soc. 2004 Jun 30;126(25):8010-9. doi: 10.1021/ja049345y.

Abstract

The relative Cu(2+)/Cu(+) reduction potentials of six type-1 copper sites (cucumber stellacyanin, P. aeruginosa azurin, poplar plastocyanin, C. cinereus laccase, T. ferrooxidans rusticyanin, and human ceruloplasmin), which lie in a reduction potential range from 260 mV to over 1000 mV, have been studied by quantum mechanical calculations. The range and relative orderings of the reduction potentials are reproduced very well compared to experimental values. The study suggests that the main structural determinants of the relative reduction potentials of the blue copper sites are located within 6 A of the Cu atoms. Further analysis suggests that the reduction potential differences of type-1 copper sites are caused by axial ligand interactions, hydrogen bonding to the S(Cys), and protein constraint on the inner sphere ligand orientations. The low reduction potential of cucumber stellacyanin is due mainly to a glutamine ligand at the axial position, rather than a methionine or a hydrophobic residue as in the other proteins. A stronger interaction with a backbone carbonyl group is a prime contributor to the lower reduction potential of P. aeruginosa azurin as compared to poplar plastocyanin, whereas the reverse is true for C. cinereus laccase and T. ferrooxidans rusticyanin. The lack of an axial methonine ligand also contributes significantly to the increased reduction potentials of C. cinereus laccase and human ceruloplasmin. However, in the case of C. cinereus laccase, this increase is attenuated by the presence of only one amide NH hydrogen bond to the S(Cys) rather than two in the other proteins. In human ceruloplasmin the reduction potential is further increased by the structural distortion of the equatorial ligand orientation.

摘要

通过量子力学计算研究了六种1型铜位点(黄瓜星蓝蛋白、铜绿假单胞菌天青蛋白、杨树质体蓝素、灰盖鬼伞漆酶、嗜铁氧化亚铁硫杆菌rusticyanin和人铜蓝蛋白)的相对Cu(2+)/Cu(+)还原电位,其还原电位范围为260 mV至超过1000 mV。与实验值相比,还原电位的范围和相对顺序得到了很好的再现。该研究表明,蓝色铜位点相对还原电位的主要结构决定因素位于距铜原子6埃范围内。进一步分析表明,1型铜位点的还原电位差异是由轴向配体相互作用、与S(半胱氨酸)的氢键以及内球配体取向的蛋白质限制引起的。黄瓜星蓝蛋白的低还原电位主要是由于轴向位置的谷氨酰胺配体,而不是其他蛋白质中的甲硫氨酸或疏水残基。与杨树质体蓝素相比,与主链羰基的更强相互作用是铜绿假单胞菌天青蛋白还原电位较低的主要原因,而灰盖鬼伞漆酶和嗜铁氧化亚铁硫杆菌rusticyanin则相反。缺乏轴向甲硫氨酸配体也显著有助于灰盖鬼伞漆酶和人铜蓝蛋白还原电位的增加。然而,在灰盖鬼伞漆酶的情况下,这种增加因仅存在一个与S(半胱氨酸)的酰胺NH氢键而不是其他蛋白质中的两个而减弱。在人铜蓝蛋白中,赤道配体取向的结构畸变进一步增加了还原电位。

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