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重复的SP11基因在甘蓝的S15单倍型中产生可变转录本。

Duplicated SP11 genes produce alternative transcripts in the S15 haplotype of Brassica oleracea.

作者信息

Shiba Hiroshi, Park Jong-In, Suzuki Go, Matsushita Masanori, Nou Ill-Sup, Isogai Akira, Takayama Seiji, Watanabe Masao

机构信息

Graduate School of Biological Sciences, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma 630-0101, Japan.

出版信息

Genes Genet Syst. 2004 Apr;79(2):87-93. doi: 10.1266/ggs.79.87.

DOI:10.1266/ggs.79.87
PMID:15215674
Abstract

Self-incompatibility (SI) discriminating self and non-self pollen is regulated by S-locus genes in Brassica. In most S haplotypes, a set of three highly polymorphic genes, SLG, SRK, and SP11, is located at the S-locus region. In the present study, we found duplicated SP11 genes, S15-SP11a, S15-SP11b, and S15-SP11b', in the self-incompatible S15 haplotype of B. oleracea. RNA gel blot and reverse transcription polymerase chain reaction (RT-PCR) analyses showed that two different sizes of SP11 transcripts were specifically detected in anther tissues: a 0.65-kb transcript corresponded to S15-SP11a (an exon-1 region of S15-SP11b was also co-transcribed in some cases), and a 1.4-kb transcript contained the duplicated three genes, S15-SP11a, S15-SP11b, and an exon-1 region of S15-SP11b', all three of which were connected to intergenic spacer regions.

摘要

在芸苔属植物中,自交不亲和性(SI)可区分自身和非自身花粉,它受S位点基因调控。在大多数S单倍型中,一组三个高度多态的基因,即SLG、SRK和SP11,位于S位点区域。在本研究中,我们在甘蓝的自交不亲和S15单倍型中发现了重复的SP11基因,即S15-SP11a、S15-SP11b和S15-SP11b'。RNA凝胶印迹和逆转录聚合酶链反应(RT-PCR)分析表明,在花药组织中特异性检测到两种不同大小的SP11转录本:一个0.65 kb的转录本对应于S15-SP11a(在某些情况下,S15-SP11b的外显子1区域也会一起转录),一个1.4 kb的转录本包含重复的三个基因,即S15-SP11a、S15-SP11b和S15-SP11b'的外显子1区域,这三个基因均与基因间隔区相连。

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