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用于构建银狐(赤狐)遗传图谱的标记集。

A marker set for construction of a genetic map of the silver fox (Vulpes vulpes).

作者信息

Kukekova A V, Trut L N, Oskina I N, Kharlamova A V, Shikhevich S G, Kirkness E F, Aguirre G D, Acland G M

机构信息

James A. Baker Institute for Animal Health, College of Veterinary Medicine, Cornell University, Ithaca, NY 14853, USA.

出版信息

J Hered. 2004 May-Jun;95(3):185-94. doi: 10.1093/jhered/esh033.

Abstract

The silver fox, a variant of the red fox (Vulpes vulpes), is a close relative of the dog (Canis familiaris). Cytogenetic differences and similarities between these species are well understood, but their genomic organizations have not been compared at higher resolution. Differences in their behavior also remain unexplained. Two silver fox strains demonstrating markedly different behavior have been generated at the Institute of Cytology and Genetics of the Russian Academy of Sciences. Foxes selected for tameness are friendly, like domestic dogs, while foxes selected for aggression resist human contact. To refine our understanding of the comparative genomic organization of dogs and foxes, and enable a study of the genetic basis of behavior in these fox strains, we need a meiotic linkage map of the fox. Towards this goal we generated a primary set of fox microsatellite markers. Four hundred canine microsatellites, evenly distributed throughout the canine genome, have been identified that amplify robustly from fox DNA. Polymorphism information content (PIC) values were calculated for a representative subset of these markers and population inbreeding coefficients were determined for tame and aggressive foxes. To begin to identify fox-specific single nucleotide polymorphisms (SNPs) in genes involved in the neurobiology of behavior, fox and dog orthologs of serotonin 5-HT1A and 5-HT1B receptor genes have been cloned. Sequence comparison of these genes from tame and aggressive foxes reveal several SNPs. The close relationship of the fox and dog enables canine genomic tools to be utilized in developing a fox meiotic map and mapping behavioral traits in the fox.

摘要

银狐是赤狐(赤狐属)的一个变种,是狗(犬属)的近亲。这些物种之间的细胞遗传学差异和相似性已为人熟知,但它们的基因组结构尚未在更高分辨率下进行比较。它们行为上的差异也仍未得到解释。俄罗斯科学院细胞学与遗传学研究所培育出了两种行为表现明显不同的银狐品系。被选作温顺型的狐狸很友好,就像家养狗一样,而被选作攻击性强的狐狸则抗拒与人类接触。为了深化我们对狗和狐狸比较基因组结构的理解,并能够研究这些狐狸品系行为的遗传基础,我们需要一张狐狸的减数分裂连锁图谱。为实现这一目标,我们生成了一组初步的狐狸微卫星标记。已经鉴定出400个均匀分布在犬类基因组中的犬类微卫星,它们能从狐狸DNA中高效扩增。计算了这些标记的一个代表性子集的多态性信息含量(PIC)值,并确定了温顺型和攻击性狐狸的群体近亲繁殖系数。为了开始鉴定参与行为神经生物学的基因中的狐狸特异性单核苷酸多态性(SNP),已经克隆了血清素5-HT1A和5-HT1B受体基因的狐狸和狗的直系同源基因。对来自温顺型和攻击性狐狸的这些基因进行序列比较,发现了几个SNP。狐狸和狗的密切关系使得犬类基因组工具能够用于构建狐狸的减数分裂图谱以及定位狐狸的行为特征。

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