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通过机理数学建模确定逆向转移的机制。

Determination of the mechanism of retrotransfer by mechanistic mathematical modeling.

作者信息

Top E, Vanrolleghem P, Mergeay M, Verstraete W

机构信息

Laboratory of Microbial Ecology, Faculty of Agricultural Sciences, University of Gent, Belgium.

出版信息

J Bacteriol. 1992 Sep;174(18):5953-60. doi: 10.1128/jb.174.18.5953-5960.1992.

Abstract

Two mathematical models to elucidate the mechanism of retromobilization (or retrotransfer), that is, the ability of conjugative plasmids to mobilize genes into the cell containing the conjugative plasmid, were developed. This study deals with retromobilization of nonconjugative plasmids (Tra-Mob+). Plasmid transfer was modeled by two mass action models. The first is based on the hypothesis that retromobilization of the Tra-Mob+ vector occurs in one step, by means of the pilus formed by the Tra+ plasmid in the original host. In the second model, retromobilization is considered to be a two-step process involving two transfer events. The first step involves the transfer of the Tra+ plasmid from the recipient cell to the donor of the nonconjugative vector, and during the second encounter the nonconjugative vector is mobilized toward the recipient. Since the relationships between the number of transconjugants and the number of recipients for the two models are different, filter matings were performed for short time periods with different initial densities of the recipient population. Comparison of the numbers of transconjugants with the results of the mathematical equations confirmed the hypothesis that retromobilization is a one-step conjugation process.

摘要

开发了两种数学模型来阐明反向迁移(或反向转移)机制,即接合质粒将基因转移到含有接合质粒的细胞中的能力。本研究涉及非接合质粒(Tra-Mob+)的反向迁移。通过两个质量作用模型对质粒转移进行建模。第一个模型基于这样的假设:Tra-Mob+载体的反向迁移通过原始宿主中Tra+质粒形成的菌毛一步发生。在第二个模型中,反向迁移被认为是一个涉及两个转移事件的两步过程。第一步涉及Tra+质粒从受体细胞转移到非接合载体的供体,在第二次相遇时,非接合载体向受体移动。由于两个模型中接合子数量与受体数量之间的关系不同,因此在短时间内对受体群体的不同初始密度进行了滤膜交配。将接合子数量与数学方程的结果进行比较,证实了反向迁移是一步接合过程的假设。

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本文引用的文献

1
Mathematical Model of Plasmid Transfer between Strains of Streptomycetes in Soil Microcosms.
Appl Environ Microbiol. 1990 Oct;56(10):3139-45. doi: 10.1128/aem.56.10.3139-3145.1990.
3
Rapid procedure for detection and isolation of large and small plasmids.
J Bacteriol. 1981 Mar;145(3):1365-73. doi: 10.1128/jb.145.3.1365-1373.1981.
4
Experimental and mathematical models of Escherichia coli plasmid transfer in vitro and in vivo.
Infect Immun. 1983 Jan;39(1):60-84. doi: 10.1128/iai.39.1.60-84.1983.
8
Properties of an R factor from Pseudomonas aeruginosa.
J Bacteriol. 1971 Dec;108(3):1244-9. doi: 10.1128/jb.108.3.1244-1249.1971.
9
Predictive model of conjugative plasmid transfer in the rhizosphere and phyllosphere.
Appl Environ Microbiol. 1988 Feb;54(2):343-7. doi: 10.1128/aem.54.2.343-347.1988.
10
Incompatibility group P plasmids: genetics, evolution, and use in genetic manipulation.
Annu Rev Microbiol. 1987;41:77-101. doi: 10.1146/annurev.mi.41.100187.000453.

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