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大肠杆菌质粒在体外和体内转移的实验模型与数学模型

Experimental and mathematical models of Escherichia coli plasmid transfer in vitro and in vivo.

作者信息

Freter R, Freter R R, Brickner H

出版信息

Infect Immun. 1983 Jan;39(1):60-84. doi: 10.1128/iai.39.1.60-84.1983.

Abstract

Little is known about the factors that govern plasmid transfers in natural ecosystems such as the gut. The consistent finding by earlier workers that plasmid transfer in the normal gut can be detected only at very low rates, if at all, has given rise to numerous speculations concerning the presence in vivo of various inhibitors of plasmid transfer. Plasmids R1, R1drd-19, and pBR322 were studied in Escherichia coli K-12 and wild-type E. coli hosts in two experimental systems: (i) gnotobiotic mice carrying a synthetic indigenous microflora (F-strains) which resemble in their function the normal indigenous microflora of the mouse large intestine, and (ii) anaerobic continuous-flow cultures of indigenous large intestinal microflora of the mouse, which can simulate bacterial interactions observed in the mouse gut. Mathematical models were developed to estimate plasmid transfer rates as a measure of the "fertility," i.e., of the intrinsic ability to transfer the plasmid under the environmental conditions of the gut. The models also evaluate the effects of plasmid segregation, reduction of the growth rates of plasmid-bearing bacterial hosts, repression of transfer functions, competition for nutrients, and bacterial attachment to the wall of the gut or culture vessel. Some confidence in the validity of these mathematical models was gained because they were able to reproduce a number of known phenomena such as the repression of fertility of the R1 plasmid, as well as known differences in the transmission and mobilization of the plasmids studied. Interpretation of the data obtained permitted a number of conclusions, some of which were rather unexpected. (i) Fertility of plasmid-bearing E. coli in the normal intestine was not impaired. The observed low rates of plasmid transfer in the normal gut can be explained on quantitative grounds alone and do not require hypothetical inhibitory mechanisms. (ii) Conditions for long-term spread and maintenance throughout human or animal populations of a diversity of conjugative and nonconjugative plasmids may be optimal among E. coli strains of low fertility, as are found among wild-type strains. (iii) E. coli strains carrying plasmid pBR322 plus R1drd-19 were impaired in their ability to transfer R1drd-19, but strains carrying pBR322 were significantly better recipients of R1drd-19 than a plasmid-free recipient E. coli. (iv) Long-term coexistence of plasmid-bearing and plasmid-free E. coli, in spite of undiminished fertility, appeared to be due to a detrimental effect of the plasmid on the growth rate of its host bacterium, rather than due to high rates of plasmid segregation. (v) Mathematical analysis of experimental data published by earlier investigators is consistent with the conclusion that plasmid transfer occurs consistently in the human gut, but that the resulting transconjugant E. coli populations are too small to be detected regularly with the culture methods used by earlier investigators. It is concluded that the long-term interactions observed were often the consequences of minor differences in parameters such as growth rates, fertility, rates of segregation, etc., which were too small to be detected except by precise mathematical analysis of long-term experiments, but which were nevertheless decisive determinants of the ultimate fates of the plasmids and their hosts.

摘要

对于诸如肠道等自然生态系统中控制质粒转移的因素,人们了解甚少。早期研究人员一致发现,正常肠道中的质粒转移即便能被检测到,速率也非常低,这引发了众多关于体内存在各种质粒转移抑制剂的猜测。在两个实验系统中,对大肠杆菌K - 12和野生型大肠杆菌宿主中的质粒R1、R1drd - 19和pBR322进行了研究:(i)无菌小鼠携带合成的原生微生物群落(F菌株),其功能类似于小鼠大肠的正常原生微生物群落;(ii)小鼠原生大肠微生物群落的厌氧连续流动培养物,可模拟在小鼠肠道中观察到的细菌相互作用。建立了数学模型来估计质粒转移速率,以此作为“繁殖力”的衡量指标,即质粒在肠道环境条件下的内在转移能力。这些模型还评估了质粒分离、携带质粒的细菌宿主生长速率降低、转移功能的抑制、对营养物质的竞争以及细菌附着于肠道壁或培养容器壁的影响。由于这些数学模型能够重现一些已知现象,如R1质粒繁殖力的抑制,以及所研究质粒在传递和动员方面已知的差异,因此人们对其有效性有了一定信心。对所获数据的解释得出了一些结论,其中一些相当出人意料。(i)正常肠道中携带质粒的大肠杆菌的繁殖力并未受损。在正常肠道中观察到的低质粒转移速率仅从数量角度即可解释,无需假设抑制机制。(ii)在低繁殖力的大肠杆菌菌株中,如野生型菌株中所发现的那样,多种接合型和非接合型质粒在人类或动物群体中进行长期传播和维持的条件可能是最佳的。(iii)携带质粒pBR322加R1drd - 19的大肠杆菌菌株转移R1drd - 19的能力受损,但携带pBR322的菌株作为R1drd - 19的受体明显优于无质粒的受体大肠杆菌。(iv)携带质粒和无质粒的大肠杆菌长期共存,尽管繁殖力未减,但似乎是由于质粒对其宿主细菌生长速率产生了有害影响,而非由于质粒分离率高。(v)对早期研究人员发表的实验数据进行数学分析,与以下结论一致:质粒转移在人类肠道中持续发生,但由此产生的转接合子大肠杆菌群体太小,无法用早期研究人员使用的培养方法定期检测到。得出结论认为,观察到的长期相互作用往往是生长速率、繁殖力、分离率等参数微小差异的结果,这些差异太小,除非通过对长期实验进行精确数学分析否则无法检测到,但它们仍然是质粒及其宿主最终命运的决定性因素。

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