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基于线粒体序列数据推断的鲷科(鲷类)鱼类系统发育树。

A phylogeny of the fish family Sparidae (porgies) inferred from mitochondrial sequence data.

作者信息

Orrell Thomas M, Carpenter Kent E

机构信息

NOAA/NMFS Systematics Laboratory, Smithsonian Institution, NHB MRC-153, P.O. Box 37012, Washington, DC 20013-7012, USA.

出版信息

Mol Phylogenet Evol. 2004 Aug;32(2):425-34. doi: 10.1016/j.ympev.2004.01.012.

Abstract

The porgies (Sparidae) comprise a diverse group of neritic fishes with a broad geographic distribution. We used mitochondrial DNA sequences from partial 16S ribosomal RNA and cytochrome b genes to reconstruct the phylogenetic history of these fishes. Sequences from 38 sparid species, 10 species in outgroups closely related to sparids, seven basal percoid species, and a non-perciform outgroup species were analyzed with parsimony and maximum likelihood. The Sparidae were monophyletic with the inclusion of Spicara, which is currently placed in the Centracanthidae. The genera Spicara, Pagrus, and Pagellus, were not monophyletic indicating a need for revision. Two main sparid lineages were recovered in all analyses, but the previously proposed six sparid subfamilies (Boopsinae, Denticinae, Diplodinae, Pagellinae, Pagrinae, and Sparinae) were not monophyletic. This suggests that dentition and feeding modes, upon which these subfamilies are based, were independently derived multiple times within sparid fishes. There was no evidence from the 16S or combined analyses for a monophyletic Sparoidea.

摘要

鲷科鱼类是一群多样化的浅海鱼类,地理分布广泛。我们利用线粒体DNA序列,从部分16S核糖体RNA和细胞色素b基因来重建这些鱼类的系统发育史。对38种鲷科鱼类、与鲷科密切相关的10个外类群物种、7种基部鲈形目物种以及1种非鲈形目外类群物种的序列进行了简约法和最大似然法分析。鲷科是单系的,其中包括目前置于棘鲷科的斯氏鲷属。斯氏鲷属、真鲷属和黄鳍鲷属不是单系的,这表明需要修订。在所有分析中都恢复了两个主要的鲷科谱系,但先前提出的六个鲷科亚科(眶棘鲈亚科、牙鲷亚科、双鳍鲷亚科、黄鳍鲷亚科、真鲷亚科和鲷亚科)不是单系的。这表明这些亚科所基于的齿列和摄食模式在鲷科鱼类中多次独立演化而来。16S或联合分析没有证据表明有一个单系的鲷亚目。

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