Suppr超能文献

基于线粒体基因分析推断的鲷科(鲈形目:硬骨鱼纲)综合系统发育研究

Comprehensive phylogeny of the family Sparidae (Perciformes: Teleostei) inferred from mitochondrial gene analyses.

作者信息

Chiba Satoru N, Iwatsuki Yukio, Yoshino Tetsuo, Hanzawa Naoto

机构信息

Graduate school of Science and Engineering, Yamagata University, Yamagata, Japan.

出版信息

Genes Genet Syst. 2009 Apr;84(2):153-70. doi: 10.1266/ggs.84.153.

Abstract

Sparid fishes consist of approximately 115 species in 33 genera that are broadly distributed in tropical and temperate coastal waters. Although several phylogenetic analyses were conducted based on specific molecular markers, their classification remains unresolved. Here, we present the most comprehensive molecular phylogeny of the family Sparidae to date, based on cytochrome b (cyt-b) genes. We determined 18 sequences of sparids and conducted phylogenetic analyses among 72 individuals representing 66 sparids with 23 outgroup species. Phylogenetic trees were constructed according to partitioned Maximum Likelihood (ML) and Bayesian methods. The phylogenetic analyses were conducted on two different data sets (including all positions; RY-coding). The phylogenetic trees showed monophyly of the family Sparidae with a different taxon, centracanthid Spicara. The subfamilies in the Sparidae in all trees are non-monophyletic and do not agree with current classification of the subfamilies. The genera Acanthopagrus, Cheimerius, Dentex, Diplodus, Pagellus, Pagrus, and Spicara are also non-monophyletic and their classifications should be revised based on the phylogenetic relationships and reinvestigation of morphological characters. The sparids are divided into three major clades, A, B and C, respectively in the ML tree based on all codon positions, whereas clade C was paraphyletic in the other trees. The species in clade C are known to be present in the eastern Pacific to western Atlantic, whereas those in clades A and B are distributed in various oceanic regions. Some sub-clades in clades A and B consist of species that are distributed in defined local regions. We further investigated evolutionary patterns of 87 morphological characters by ancestral character-state reconstruction according to the parsimony criteria. The results suggested high evolutionary plasticity of the characters in sparids, indicating that it causes species-diversity and taxonomic confusion at various taxonomic levels, and that such convergent evolution may occur more frequently also in other coastal fishes.

摘要

鲷科鱼类由33个属的约115个物种组成,广泛分布于热带和温带沿海水域。尽管基于特定分子标记进行了多项系统发育分析,但其分类仍未解决。在此,我们基于细胞色素b(cyt-b)基因,呈现了迄今为止最全面的鲷科分子系统发育研究。我们测定了18个鲷科序列,并对代表66种鲷科鱼类的72个个体以及23个外类群物种进行了系统发育分析。根据分区最大似然法(ML)和贝叶斯方法构建了系统发育树。系统发育分析在两个不同的数据集上进行(包括所有位点;RY编码)。系统发育树显示鲷科与不同分类单元的棘鲷科鱼类Spicara构成单系群。所有树中的鲷科亚科均非单系群,与当前亚科分类不一致。棘鲷属、锯唇鲷属、牙鲷属、二长棘鲷属、海鲷属、真鲷属和棘鲷属也非单系群,其分类应根据系统发育关系和对形态特征的重新研究进行修订。在基于所有密码子位点的ML树中,鲷科鱼类分别分为三个主要分支,A、B和C,而在其他树中分支C是并系群。已知分支C中的物种分布于东太平洋至西大西洋,而分支A和B中的物种分布于不同海洋区域。分支A和B中的一些亚分支由分布在特定局部区域的物种组成。我们根据简约标准通过祖先特征状态重建进一步研究了87个形态特征的进化模式。结果表明鲷科鱼类特征具有高度进化可塑性,这表明它在不同分类水平上导致了物种多样性和分类混乱,并且这种趋同进化在其他沿海鱼类中可能也更频繁地发生。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验