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7-脱氮-2'-脱氧-7-丙炔基鸟苷

7-Deaza-2'-deoxy-7-propynylguanosine.

作者信息

Seela Frank, Shaikh Khalil, Eickmeier Henning

机构信息

Laboratorium für Organische und Bioorganische Chemie, Institut für Chemie, Universität Osnabrück, Barbarastrasse 7, 49069, Germany.

出版信息

Acta Crystallogr C. 2004 Jul;60(Pt 7):o489-91. doi: 10.1107/S0108270104011552. Epub 2004 Jun 22.

Abstract

The title compound, C14H16N4O4, adopts the anti conformation at the glycosylic bond [chi -117.1 (5) degrees]. The sugar pucker of the 2'-deoxyribofuranosyl moiety is C2'-endo-C3'-exo, 2T3 (S-type). The orientation of the exocyclic C4'-C5' bond is +sc (gauche). The propynyl group is linear and coplanar with the nucleobase moiety. The structure of the compound is stabilized by several hydrogen bonds (N-H...O and O-H...O), leading to the formation of a multi-layered network. The nucleobases, as well as the propynyl groups, are stacked. This stacking might cause the extraordinary stability of DNA duplexes containing this compound.

摘要

标题化合物C14H16N4O4在糖苷键处采取反式构象[χ -117.1(5)°]。2'-脱氧核糖呋喃糖部分的糖环构象为C2'-内-C3'-外,2T3(S型)。环外C4'-C5'键的取向为+sc( gauche)。丙炔基是线性的,与核碱基部分共面。该化合物的结构通过几个氢键(N-H…O和O-H…O)得以稳定,从而形成多层网络。核碱基以及丙炔基相互堆积。这种堆积可能导致含有该化合物的DNA双链体具有非凡的稳定性。

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