Nieuwenhuizen Theo M, Klumpp Stefan, Lipowsky Reinhard
Institute for Theoretical Physics, University of Amsterdam, Valckenierstraat 65, 1018 XE Amsterdam, The Netherlands.
Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Jun;69(6 Pt 1):061911. doi: 10.1103/PhysRevE.69.061911. Epub 2004 Jun 9.
Movements of molecular motors on cytoskeletal filaments are described by directed walks on a line. Detachment from this line is allowed to occur with a small probability. Motion in the surrounding fluid is described by symmetric random walks. Effects of detachment and reattachment are calculated by an analytical solution of the master equation in two and three dimensions. Results are obtained for the fraction of bound motors, their average velocity, displacement, and dispersion. The analytical results are in good agreement with results from Monte Carlo simulations and confirm the behavior predicted by scaling arguments. The diffusion coefficient parallel to the filament becomes anomalously large since detachment and subsequent reattachment, in the presence of directed motion of the bound motors, leads to a broadening of the density distribution. The occurrence of protofilaments on a microtubule is modeled by internal states of the binding sites. After a transient time, all protofilaments become equally populated.
分子马达在细胞骨架丝上的运动可通过直线上的定向行走来描述。以小概率允许从这条线上脱离。周围流体中的运动通过对称随机行走来描述。脱离和重新附着的影响通过二维和三维主方程的解析解来计算。得到了结合马达的比例、它们的平均速度、位移和扩散的结果。解析结果与蒙特卡罗模拟结果高度吻合,并证实了标度论证所预测的行为。由于在结合马达的定向运动存在的情况下,脱离和随后的重新附着会导致密度分布变宽,所以平行于细丝的扩散系数会异常增大。微管上原丝的出现通过结合位点的内部状态来建模。经过一个瞬态时间后,所有原丝变得同样密集。