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一个用于对异步分裂细胞群体中的生成结构进行建模的通用数学框架。

A general mathematical framework to model generation structure in a population of asynchronously dividing cells.

作者信息

León Kalet, Faro Jose, Carneiro Jorge

机构信息

Centro de Inmunología Molecular, Habana, Cuba.

出版信息

J Theor Biol. 2004 Aug 21;229(4):455-76. doi: 10.1016/j.jtbi.2004.04.011.

Abstract

In otherwise homogeneous cell populations, individual cells undergo asynchronous cell cycles. In recent years, interest in this fundamental observation has been boosted by the wide usage of CFSE, a fluorescent dye that allows the precise estimation by flow cytometry of the number of divisions performed by different cells in a population, and thus the generation structure. In this work, we propose two general mathematical frameworks to model the time evolution of generation structure in a cell population. The first modeling framework is more descriptive and assumes that cell division time is distributed in the cell population, due to intrinsic noise in the molecular machinery in individual cells; while the second framework assumes that asynchrony in cell division stems from randomness in the interactions individual cells make with environmental agents. We reduce these formalisms to recover two preexistent models, which build on each of the hypotheses. When confronted to kinetics data on CFSE labeled cells taken from literature, these models can fit precursor frequency distributions at each measured time point. However, they fail to fit the whole kinetics of precursor frequency distributions. In contrast, two extensions of those models, derived also from our general formalisms, fit equally well both the whole kinetics and individual profiles at each time point, providing a biologically reasonable estimation of parameters. We prove that the distribution of cell division times is not Gaussian, as previously proposed, but is better described by an asymmetric distribution such as the Gamma distribution. We show also that the observed cell asynchrony could be explained by the existence of a single transitional event during cell division. Based on these results, we suggest new ways of combining theoretical and experimental work to assess how much of noise in internal machinery of the cell and interactions with the environmental agents contribute to the asynchrony in cell division.

摘要

在其他方面均一的细胞群体中,单个细胞经历异步细胞周期。近年来,由于CFSE(一种荧光染料)的广泛使用,人们对这一基本观察结果的兴趣大增。CFSE能够通过流式细胞术精确估计群体中不同细胞的分裂次数,进而确定世代结构。在这项工作中,我们提出了两个通用的数学框架来模拟细胞群体中世代结构的时间演变。第一个建模框架更具描述性,它假设由于单个细胞分子机制中的内在噪声,细胞分裂时间在细胞群体中呈分布状态;而第二个框架则假设细胞分裂的异步性源于单个细胞与环境因子相互作用的随机性。我们简化这些形式体系以恢复两个基于各自假设的已有模型。当面对从文献中获取的CFSE标记细胞的动力学数据时,这些模型能够拟合每个测量时间点的前体频率分布。然而,它们无法拟合前体频率分布的整个动力学过程。相比之下,同样从我们的通用形式体系推导而来的这些模型的两个扩展,在每个时间点都能同样好地拟合整个动力学过程和个体分布,从而提供生物学上合理的参数估计。我们证明细胞分裂时间的分布并非如先前所提出的那样是高斯分布,而是更适合用诸如伽马分布这样的非对称分布来描述。我们还表明,观察到的细胞异步性可以通过细胞分裂过程中存在单个过渡事件来解释。基于这些结果,我们提出了将理论工作与实验工作相结合的新方法,以评估细胞内部机制中的噪声以及与环境因子的相互作用对细胞分裂异步性的贡献程度。

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