Durinck Steffen, Allemeersch Joke, Carey Vincent J, Moreau Yves, De Moor Bart
Department of Electronical Engineering, ESAT-SCD, K.U. Leuven, Kasteelpark Arenberg 10, 3001, Leuven-Heverlee, Belgium.
Bioinformatics. 2004 Dec 12;20(18):3641-2. doi: 10.1093/bioinformatics/bth396. Epub 2004 Jul 15.
The microarray gene expression markup language (MAGE-ML) is a widely used XML (eXtensible Markup Language) standard for describing and exchanging information about microarray experiments. It can describe microarray designs, microarray experiment designs, gene expression data and data analysis results. We describe RMAGEML, a new Bioconductor package that provides a link between cDNA microarray data stored in MAGE-ML format and the Bioconductor framework for preprocessing, visualization and analysis of microarray experiments.
http://www.bioconductor.org. Open Source.
微阵列基因表达标记语言(MAGE - ML)是一种广泛使用的XML(可扩展标记语言)标准,用于描述和交换有关微阵列实验的信息。它可以描述微阵列设计、微阵列实验设计、基因表达数据和数据分析结果。我们介绍了RMAGEML,这是一个新的Bioconductor软件包,它在以MAGE - ML格式存储的cDNA微阵列数据与用于微阵列实验预处理、可视化和分析的Bioconductor框架之间建立了联系。