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细菌视紫红质质子泵循环中Arg82氢键的改变:低温偏振傅里叶变换红外光谱研究

Altered hydrogen bonding of Arg82 during the proton pump cycle of bacteriorhodopsin: a low-temperature polarized FTIR spectroscopic study.

作者信息

Tanimoto Taro, Shibata Mikihiro, Belenky Marina, Herzfeld Judith, Kandori Hideki

机构信息

Department of Materials Science and Engineering, Nagoya Institute of Technology, Showa-ku, Nagoya 466-8555, Japan.

出版信息

Biochemistry. 2004 Jul 27;43(29):9439-47. doi: 10.1021/bi049368p.

Abstract

Light-driven proton transport in bacteriorhodopsin (BR) is achieved by dynamic rearrangement of the hydrogen-bonding network inside the membrane protein. Arg82 is located between the Schiff base region and proton release group, and has a major influence on the pK(a) values of these groups. It is believed that Arg82 changes its hydrogen-bonding acceptors during the pump cycle of BR, stages of which are correlated with proton movement along the transport pathway. In this study, we compare low-temperature polarized FTIR spectra of [eta(1,2)-(15)N]arginine-labeled BR in the 2750-2000 cm(-1) region with those of unlabeled BR for the K, L, M, and N intermediates. In the K-minus-BR difference spectra, (15)N-shifted modes were found at 2292 (-)/2266 (+) cm(-1) and at 2579 (-)/2567 (+) cm(-1). The former corresponds to strong hydrogen bonding, while the latter corresponds to very weak hydrogen bonding. Both N-D stretches probably originate from Arg82, the former oriented toward water 406 and the latter toward the extracellular side, and both hydrogen bonds are somewhat strengthened upon retinal photoisomerization. This perturbation of arginine hydrogen bonding is entirely relaxed in the L intermediate where no (15)N-isotope shifts are observed in the difference spectrum. In the M intermediate, the frequency is not significantly altered from that in BR. However, the polarized FTIR spectra strongly suggest that the dipolar orientation of the strongly hydrogen bonded N-D group of Arg82 is changed from perpendicular to parallel to the membrane plane. Such a change is presumably related to the motion of the Arg82 side chain from the Schiff base region to the extracellular proton release group. Additional bands corresponding to weak hydrogen bonding were observed in both the M-minus-BR and N-minus-BR spectra. Changes in hydrogen-bonding structures involving Arg82 are discussed on the basis of these FTIR observations.

摘要

细菌视紫红质(BR)中的光驱动质子运输是通过膜蛋白内部氢键网络的动态重排实现的。精氨酸82(Arg82)位于席夫碱区域和质子释放基团之间,对这些基团的pK(a)值有重大影响。据信,在BR的泵循环过程中,Arg82会改变其氢键受体,该循环的各个阶段与质子沿运输途径的移动相关。在本研究中,我们将[η(1,2)-(15)N]精氨酸标记的BR在2750 - 2000 cm(-1)区域的低温偏振傅里叶变换红外光谱与未标记的BR在K、L、M和N中间体状态下的光谱进行了比较。在K减BR的差谱中,在2292(-)/2266(+)cm(-1)和2579(-)/2567(+)cm(-1)处发现了(15)N位移模式。前者对应于强氢键,而后者对应于非常弱的氢键。两个N-D伸缩振动可能都源自Arg82,前者朝向水406,后者朝向细胞外侧,并且在视网膜光异构化时,这两个氢键都会有所增强。精氨酸氢键的这种扰动在L中间体中完全松弛,在差谱中未观察到(15)N同位素位移。在M中间体中,频率与BR中的频率相比没有显著变化。然而,偏振傅里叶变换红外光谱强烈表明,Arg82的强氢键结合的N-D基团的偶极取向从垂直于膜平面变为平行于膜平面。这种变化可能与Arg82侧链从席夫碱区域向细胞外质子释放基团的移动有关。在M减BR和N减BR光谱中都观察到了对应于弱氢键的额外谱带。基于这些傅里叶变换红外光谱观察结果,讨论了涉及Arg82的氢键结构变化。

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