辅助性T细胞1和2发育过程中Il4-Il13基因座的染色质景观动态

Chromatin landscape dynamics of the Il4-Il13 locus during T helper 1 and 2 development.

作者信息

Baguet Aurélie, Bix Mark

机构信息

Department of Immunology, University of Washington, Seattle, WA 98195-7650, USA.

出版信息

Proc Natl Acad Sci U S A. 2004 Aug 3;101(31):11410-5. doi: 10.1073/pnas.0403334101. Epub 2004 Jul 22.

Abstract

Il4 and Il13 encode the canonical T helper 2 (TH2) cytokines responsible both for promoting immune responses against extracellular pathogens and, when misregulated, causing allergic and autoimmune disease. The expression potential of these genes undergoes developmentally programmed repression and enhancement during commitment of naïve CD4+ T cells to the mature T helper 1 (TH1) and TH2 fates, respectively. Thus, like the globin locus, the TH2 cytokine locus provides a highly tractable system to study a developmental fate choice leading to alternative transcriptional states of either silence or permissivity. We used quantitative chromatin immunoprecipitation and RT-PCR to correlate changes in the transcriptional states of Il4 and Il13 with markers of permissive chromatin across the Il4-Il13 locus in naïve CD4+ T cells undergoing TH1 and TH2 differentiation. We provide evidence that DNaseI hypersensitive site V in the Il4 3' enhancer is the likely target for signals maintaining Il4 and Il13 transcriptional permissivity in naïve cells. We also demonstrate rapid acquisition of differences in H3 acetylation between TH1- and TH2-primed cells, indicating a developmentally early role for cytokine signaling in the process of TH cell fate determination. Finally, we show that transcriptional repression correlates with the disappearance of permissive H3 modifications from everywhere in the Il4-Il13 locus except hypersensitive site IV, suggesting a critical role for this element in the maintenance of transcriptional repression. Our findings are consistent with a progressive regulatory element activation/deactivation model of TH1/TH2 development.

摘要

Il4和Il13编码典型的辅助性T细胞2(TH2)细胞因子,它们既负责促进针对细胞外病原体的免疫反应,又在调控失调时引发过敏和自身免疫性疾病。在初始CD4+ T细胞分别分化为成熟的辅助性T细胞1(TH1)和TH2细胞的过程中,这些基因的表达潜能经历了程序化的抑制和增强。因此,与珠蛋白基因座一样,TH2细胞因子基因座提供了一个易于处理的系统,用于研究导致沉默或允许性等不同转录状态的发育命运选择。我们使用定量染色质免疫沉淀和RT-PCR技术,将Il4和Il13转录状态的变化与在进行TH1和TH2分化的初始CD4+ T细胞中整个Il4-Il13基因座上允许性染色质的标记相关联。我们提供证据表明,Il4 3'增强子中的DNaseI超敏位点V可能是维持初始细胞中Il4和Il13转录允许性的信号靶点。我们还证明了在TH1和TH2启动的细胞之间H3乙酰化差异的快速获得,这表明细胞因子信号在TH细胞命运决定过程中发挥了发育早期作用。最后,我们表明转录抑制与除超敏位点IV外Il4-Il13基因座各处允许性H3修饰的消失相关,这表明该元件在维持转录抑制中起关键作用。我们的发现与TH1/TH2发育的渐进性调控元件激活/失活模型一致。

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