Ogura Atsushi, Ikeo Kazuho, Gojobori Takashi
Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Mishima, 411-8540, Japan.
Genome Res. 2004 Aug;14(8):1555-61. doi: 10.1101/gr.2268104.
Although the camera eye of the octopus is very similar to that of humans, phylogenetic and embryological analyses have suggested that their camera eyes have been acquired independently. It has been known as a typical example of convergent evolution. To study the molecular basis of convergent evolution of camera eyes, we conducted a comparative analysis of gene expression in octopus and human camera eyes. We sequenced 16,432 ESTs of the octopus eye, leading to 1052 nonredundant genes that have matches in the protein database. Comparing these 1052 genes with 13,303 already-known ESTs of the human eye, 729 (69.3%) genes were commonly expressed between the human and octopus eyes. On the contrary, when we compared octopus eye ESTs with human connective tissue ESTs, the expression similarity was quite low. To trace the evolutionary changes that are potentially responsible for camera eye formation, we also compared octopus-eye ESTs with the completed genome sequences of other organisms. We found that 1019 out of the 1052 genes had already existed at the common ancestor of bilateria, and 875 genes were conserved between humans and octopuses. It suggests that a larger number of conserved genes and their similar gene expression may be responsible for the convergent evolution of the camera eye.
虽然章鱼的相机眼与人类的非常相似,但系统发育和胚胎学分析表明,它们的相机眼是独立获得的。这已被视为趋同进化的一个典型例子。为了研究相机眼趋同进化的分子基础,我们对章鱼和人类相机眼中的基因表达进行了比较分析。我们对章鱼眼的16432条EST进行了测序,得到了1052个在蛋白质数据库中有匹配项的非冗余基因。将这1052个基因与13303条已为人眼所知的EST进行比较,发现人和章鱼眼中共有729个(69.3%)基因表达。相反,当我们将章鱼眼EST与人类结缔组织EST进行比较时,表达相似性相当低。为了追踪可能与相机眼形成有关的进化变化,我们还将章鱼眼EST与其他生物的完整基因组序列进行了比较。我们发现,1052个基因中有1019个在两侧对称动物的共同祖先中就已存在,875个基因在人类和章鱼之间是保守的。这表明大量保守基因及其相似的基因表达可能是相机眼趋同进化的原因。