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关于相位关系在复杂结构中的应用。第三十三部分。大型结构与低分辨率问题。

On the application of phase relationships to complex structures. XXXIII. The problems with large structures and low resolution.

作者信息

Woolfson M M

机构信息

Department of Physics, University of York, England.

出版信息

Acta Crystallogr D Biol Crystallogr. 1993 Jan 1;49(Pt 1):13-7. doi: 10.1107/S0907444992009624.

Abstract

A conventional direct method, using the Sayre equation as a basis, has been shown to be capable of solving a small protein with data of 3.0 A resolution or better. An analysis of the Sayre equation, with data of various resolutions and with different lower limits of |E| for the contributors in the summation, shows that its effectiveness for phasing is independent of structural complexity but does decline as the resolution becomes worse. It is suggested that a practicable lower limit for the application of conventional direct methods is about 3.5 A. For large macromolecular structures the number of contributors to the summation in the Sayre equation becomes too large to handle and it is suggested that real-space methods should be used instead.

摘要

一种以塞尔方程为基础的传统直接法,已被证明能够利用分辨率为3.0埃或更高的数据解析小分子蛋白质结构。对塞尔方程进行分析,结合不同分辨率的数据以及求和中贡献项|E|的不同下限,结果表明其相位确定的有效性与结构复杂性无关,但会随着分辨率变差而降低。有人提出,传统直接法应用的实际下限约为3.5埃。对于大型大分子结构,塞尔方程求和中的贡献项数量变得过多而难以处理,因此建议改用实空间方法。

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